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@OHDSI

Observational Health Data Sciences and Informatics

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  1. CommonDataModel CommonDataModel Public

    Definition and DDLs for the OMOP Common Data Model (CDM)

    HTML 887 450

  2. Vocabulary-v5.0 Vocabulary-v5.0 Public

    Build process for the OHDSI Standardized Vocabularies. Currently not available as independent release.

    PLpgSQL 220 75

  3. Atlas Atlas Public

    ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data

    JavaScript 271 136

  4. Cyclops Cyclops Public

    Cyclops (Cyclic coordinate descent for logistic, Poisson and survival analysis) is an R package for performing large scale regularized regressions.

    C++ 38 32

  5. CohortMethod CohortMethod Public

    An R package for performing new-user cohort studies in an observational database in the OMOP Common Data Model.

    R 82 57

  6. PatientLevelPrediction PatientLevelPrediction Public

    An R package for performing patient level prediction in an observational database in the OMOP Common Data Model.

    HTML 188 88

Repositories

Showing 10 of 309 repositories
  • OHDSI/CohortConstructor’s past year of commit activity
    R 1 Apache-2.0 0 33 4 Updated Oct 31, 2024
  • Ares Public

    A Research Exploration System

    OHDSI/Ares’s past year of commit activity
    Vue 12 Apache-2.0 6 42 2 Updated Oct 31, 2024
  • Vocabulary-v5.0 Public

    Build process for the OHDSI Standardized Vocabularies. Currently not available as independent release.

    OHDSI/Vocabulary-v5.0’s past year of commit activity
    PLpgSQL 220 Unlicense 75 216 19 Updated Oct 31, 2024
  • OHDSI/OmopSketch’s past year of commit activity
    R 2 Apache-2.0 0 22 (2 issues need help) 0 Updated Oct 31, 2024
  • SelfControlledCaseSeries Public

    An R package for performing Self-Controlled Case Series (SCCS) analyses in an observational database in the OMOP Common Data Model.

    OHDSI/SelfControlledCaseSeries’s past year of commit activity
    R 13 8 10 0 Updated Oct 31, 2024
  • dbt-synthea Public

    [Under development] A dbt ETL project to convert a Synthea synthetic data set into the OMOP CDM

    OHDSI/dbt-synthea’s past year of commit activity
    Python 14 Apache-2.0 5 19 3 Updated Oct 31, 2024
  • ETL-LambdaBuilder Public

    CDM Builder leveraging AWS Lambda

    OHDSI/ETL-LambdaBuilder’s past year of commit activity
    C# 14 Apache-2.0 15 1 4 Updated Oct 30, 2024
  • OHDSI/PhenotypeR’s past year of commit activity
    R 1 Apache-2.0 0 8 0 Updated Oct 30, 2024
  • Tutorial-Hades Public

    Materials used for tutorials on HADES

    OHDSI/Tutorial-Hades’s past year of commit activity
    JavaScript 3 3 0 0 Updated Oct 30, 2024
  • Arachne Public

    Arachne Data Node web application

    OHDSI/Arachne’s past year of commit activity
    TypeScript 1 Apache-2.0 1 14 1 Updated Oct 30, 2024