Arbovirus and dengue data from Puerto Rico

Machine learning against arbovirus

This repository includes the codes and data used in the study: "Spatio-temporal clusters and patterns of spread of dengue, chikungunya, and Zika in Colombia", by Laís Picinini Freitas, Mabel Carabali, Mengru Yuan, Gloria I. Jaramillo-Ramirez, Cesar Garcia Balaguera, Berta N. Restrepo, and Kate Zinszer.

Viral genome assembly pipeline for WGS using ONT

AedesWebview on examples. Interactive Brazilian map for some diseases

Nextstrain community build 'Molecular epidemiology of Chikungunya virus'

This repository includes the codes used for the study: "Spatio-temporal modelling of the first Chikungunya epidemic in an intra-urban setting: the role of socioeconomic status, environment and temperature", by Laís P Freitas, Alexandra Schmidt, William Cossich, Oswaldo G. Cruz and Marilia S. Carvalho.

Criação de dashboard com dados de casos notificados de Dengue e Chikungunya no município de Recife durante os anos de 2020 e 2021

API NODE for improved J48 Classification Tree for the Prediction of Dengue, Chikungunya or Zika.

R script used for the paper "Space-time dynamics of a triple epidemic: dengue, chikungunya and Zika clusters in the city of Rio de Janeiro", by Laís P. Freitas, Oswaldo G. Cruz, Rachel Lowe and Marilia S. Carvalho.