Migrate from LightGraphs to Graphs.jl

Project.toml

@@ -1,20 +1,20 @@
 name = "GraphDatasets"
 uuid = "bf13de61-383b-4610-8d2c-e75fac0df62b"
 authors = ["Simon Schoelly <[email protected]> and contributors"]
-version = "0.1.1"
+version = "0.2.0"
 
 [deps]
 CSV = "336ed68f-0bac-5ca0-87d4-7b16caf5d00b"
 DataDeps = "124859b0-ceae-595e-8997-d05f6a7a8dfe"
-LightGraphs = "093fc24a-ae57-5d10-9952-331d41423f4d"
+Graphs = "86223c79-3864-5bf0-83f7-82e725a168b6"
 SimpleValueGraphs = "b43c691f-cac2-5415-8122-396fe16a49fc"
 
 [compat]
-julia = "1.5"
-SimpleValueGraphs = "0.3.1"
-DataDeps = "0.7.7"
 CSV = "0.8.3"
-LightGraphs = "1.3.5"
+DataDeps = "0.7.7"
+Graphs = "1.4.1"
+SimpleValueGraphs = "0.4"
+julia = "1.5"
 
 [extras]
 Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40"

README.md

@@ -43,9 +43,9 @@ julia> g = qm9[1234]
     edge value types: (Bool, Bool, Bool, Bool)
    graph value types: (μ = Float64, α = Float64, ϵ_HOMO = Float64, ϵ_LUMO = Float64, Δϵ = Float64, electronig_spatial_energy = Float64, ZPVE = Float64, U_0 = Float64, U = Float64, H = Float64, G = Float64, c_v = Float64, UATOM_0 = Float64, UTAM = Float64, HATOM = Float64, GATOM = Float64, A = Float64, B = Float64, C = Float64)
 
-# ValGraphCollectionView inherits from LightGraphs.AbstractGraph and SimpleValueGraphs.AbstractValGraph
+# ValGraphCollectionView inherits from Graphs.AbstractGraph and SimpleValueGraphs.AbstractValGraph
 # and can therefore be used like other graph types
-julia> using LightGraphs: diameter
+julia> using Graphs: diameter
 
 julia> diameter(g)
 7
@@ -67,7 +67,7 @@ julia> ValGraph(g)
 
 - [GraphMLDatasets.jl](https://github.com/yuehhua/GraphMLDatasets.jl)
 - [SNAPDatasets.jl](https://github.com/JuliaGraphs/SNAPDatasets.jl)
-- [LightGraphsExtras.j](https://github.com/JuliaGraphs/LightGraphsExtras.jl)
+- [GraphsExtras.j](https://github.com/JuliaGraphs/GraphsExtras.jl)
 - [MatrixMarket.jl](https://github.com/JuliaSparse/MatrixMarket.jl)
 - [MatrixDepot.jl](https://github.com/JuliaMatrices/MatrixDepot.jl)
 

src/GraphDatasets.jl

@@ -2,7 +2,7 @@ module GraphDatasets
 
 import Base: getindex, length, eltype, iterate, show, firstindex, lastindex
 
-import LightGraphs: loadgraphs, SimpleGraph
+import Graphs: loadgraphs, SimpleGraph
 
 import SimpleValueGraphs:
     nv, has_edge, is_directed,
@@ -32,7 +32,7 @@ export
     lastindex,
 
 
-    # reexport from LightGraphs & SimpleValueGraphs
+    # reexport from Graphs.jl & SimpleValueGraphs
     nv,
     has_edge,