QuasiCopula reproducibility

Scripts to reproduce the experiments performed for the QuasiCopula manuscript:

• MSE : Scripts for reproducing simulation studies comparing with MixedModels.jl. It can run with QuasiCopula v0.1.0.
• nb_vs_Rpackages : Scripts for negative binomial random intercept GLMM simulation study comparison with R packages lme4, glmmTMB, GLMMadaptive. It can run with QuasiCopula v0.1.0.
• real_data_examples : Scripts for bivariate example analyses using NHANES I Epidemiologic Followup Study data. It can run with QuasiCopula v0.1.0.

Citation

If you use OpenMendel analysis packages in your research, please cite the following reference in the resulting publications:

OPENMENDEL: a cooperative programming project for statistical genetics. Zhou H, Sinsheimer JS, Bates DM, Chu BB, German CA, Ji SS, Keys KL, Kim J, Ko S, Mosher GD, Papp JC, Sobel EM, Zhai J, Zhou JJ, Lange K. Hum Genet. 139, 61–71 (2020). doi:10.1007/s00439-019-02001-z. PMID: 30915546