Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Add a LICENSE.md file for the various test files. #768

Open
wants to merge 4 commits into
base: master
Choose a base branch
from

Commits on Aug 6, 2024

  1. Add a LICENSE.md file for the various CRAM test files.

    These are my own work on behalf of GRL.  SAM / VCF may take more
    digging to correctly attribute ownership in order to categorically
    obtain a license statement, so they have been omitted in this commit.
    jkbonfield committed Aug 6, 2024
    Configuration menu
    Copy the full SHA
    65b199b View commit details
    Browse the repository at this point in the history
  2. Add SAM, SAMtags and BAM test file LICENSE.md.

    These are almost entirely added by GRL (Sanger) with the exception of
    one added by John Marshall (Uni of Glasgow).
    jkbonfield committed Aug 6, 2024
    Configuration menu
    Copy the full SHA
    5877aab View commit details
    Browse the repository at this point in the history
  3. Add copyright / licensing statement for VCF test data.

    The bulk of the data comes from EBI's vcf-validator at
    https://github.com/EBIvariation/vcf-validator
    
    A few new ones have appeared since, and some appear to be of 1000
    genomes origin.
    jkbonfield committed Aug 6, 2024
    Configuration menu
    Copy the full SHA
    e947d73 View commit details
    Browse the repository at this point in the history
  4. Renamed LICENSE.md to LICENSE following review

    Also some minor tweakage of text.  In particular
    examples/vcf/simple.vcf is from VCFv3.1.tex and / or VCFtools, but
    there is no evidence which came first and they both have differing
    copyright statements.  (All we can do is state what is known and
    unknown.)
    jkbonfield committed Aug 6, 2024
    Configuration menu
    Copy the full SHA
    7f01aac View commit details
    Browse the repository at this point in the history