1.8
-
-i, -e
filtering: Support for custom perl scripts -
+contrast
: New plugin to annotate genotype differences between groups of samples -
+fixploidy
: New options for simpler ploidy usage -
+setGT
: Target genotypes can be set to phased by giving--new-gt p
-
run-roh.pl
: Allow to pass options directly tobcftools roh
-
Number of bug fixes
The bcftools-1.8.tar.bz2 download is the full source code release. The “Source code” downloads are generated by GitHub and are incomplete as they don't bundle HTSlib and are missing some generated files.