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added BigTrace to ecosystem
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nornil committed Aug 10, 2024
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36 changes: 36 additions & 0 deletions ecosystem/BigTrace/BigTrace.qmd
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---
title: "BigTrace plugin" # "Your_Plugin/Software_project_name"
categories: [ Fiji/ImageJ , BigDataViewer, imglib2, BigVolumeViewer] # Add categories for your project"
execute:
echo: false
about:
id: Aheading
template: jolla
image-shape: rounded
image-width: 15em
links: # Add details and copy/remove whole block if you need to change number of links.
- text: Contact
icon: envelope
href: mailto:[email protected]
- text: Documentation
icon: archive
href: https://github.com/ekatrukha/BigTrace/wiki
- text: Tutorial
icon: youtube
href: https://www.youtube.com/watch?v=Viqf4txCCJ0
- text: Fiji-imageJ
icon: image
href: https://imagej.net/plugins/bigtrace
---

::: {.alignleft}
![](BigTrace_logo.png){width=356} # If you have a figure/logo for project change name accordingly.

FIJI plugin for tracing and analysis of curvilinear structures (filaments, vessels, neurites) in volumetric microscopy datasets.

The plugin implements 3D ROIs (points, straight/curved lines, planes)
for manual/semi-automatic segmentation of lines, curves, and spotty objects.
It allows volumetric measurements of intensity and geometrical features.
The plugin is scriptable using ImageJ macros.

:::
Binary file added ecosystem/BigTrace/BigTrace_logo.png
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