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1. docker-containers docker-containers Public

   Docker containers for bioinformatic tools

   Dockerfile

2. lepto-in-silico-pcr lepto-in-silico-pcr Public

   Using PCR primers from Barragan et al. (2016) to see if they are able to detect all pathogenic, intermediate, and saprophytic Leptospira. Source = High Leptospira Diversity in Animals and Humans Co…

   Jupyter Notebook

3. wf-paired-end-illumina-assembly wf-paired-end-illumina-assembly Public archive

   WARN: Repository has moved. Use the link below or link at the top of README to access the most up to date assembly pipeline!

   Nextflow 1

4. bio-agents_and_precip bio-agents_and_precip Public

   Using public data to look at correlations between agents and precipitation.

   Python