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@canlab

Cognitive and Affective Neuroscience Laboratory

CANlab and friends: Analysis tools for neuroimaging and beyond
README.md

Welcome to the CANlab Organization GitHub. The most commonly used repositories are pinned below.

For a full list of repositories and what they contain, see here: [IN PROGRESS]

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  1. CanlabCore CanlabCore Public

    Core tools required for running Canlab Matlab toolboxes. The heart of this toolbox is object-oriented tools that enable interactive analysis of neuroimaging data and simple scripts using high-level…

    MATLAB 149 80

  2. MediationToolbox MediationToolbox Public

    Single-level and multi-level mediation analyses for any kind of data, with bootstrap-based significance testing. Neuroimaging-oriented functions allow for mediation effect parametric mapping (mappi…

    HTML 82 29

  3. Neuroimaging_Pattern_Masks Neuroimaging_Pattern_Masks Public

    Brain signature patterns, atlases of regions, and meta-analysis masks for neuroimaging data analysis.

    HTML 108 45

  4. Canlab_MKDA_MetaAnalysis Canlab_MKDA_MetaAnalysis Public

    Coordinate-based meta-analysis for neuroimaging using Multilevel Kernel Density Analysis and various other statistical tools (chi-square, clustering, correspondence analysis, parcellation)

    MATLAB 20 9

  5. CANlab_help_examples CANlab_help_examples Public

    How-to examples and a batch pipeline for second-level neuroimaging analysis. Batch scripts and examples publish HTML files with code and output.

    HTML 26 10

  6. RobustToolbox RobustToolbox Public

    Robust regression toolbox for neuroimaging data

    HTML 14 7

Repositories

Showing 10 of 64 repositories
  • CanlabCore Public

    Core tools required for running Canlab Matlab toolboxes. The heart of this toolbox is object-oriented tools that enable interactive analysis of neuroimaging data and simple scripts using high-level commands tailored to neuroimaging analysis.

    canlab/CanlabCore’s past year of commit activity
    MATLAB 149 80 31 3 Updated Oct 30, 2024
  • Neuroimaging_Pattern_Masks Public

    Brain signature patterns, atlases of regions, and meta-analysis masks for neuroimaging data analysis.

    canlab/Neuroimaging_Pattern_Masks’s past year of commit activity
    HTML 108 GPL-3.0 45 3 0 Updated Oct 30, 2024
  • WASABI_public Public

    Public repository for the Warmth, Anticipation, Sensation, Aversion, and Body-part Imaging Study (WASABI)

    canlab/WASABI_public’s past year of commit activity
    Python 2 MIT 1 0 0 Updated Oct 29, 2024
  • CANlab_help_examples Public

    How-to examples and a batch pipeline for second-level neuroimaging analysis. Batch scripts and examples publish HTML files with code and output.

    canlab/CANlab_help_examples’s past year of commit activity
    HTML 26 GPL-2.0 10 2 0 Updated Sep 23, 2024
  • FMRI_simulations Public
    canlab/FMRI_simulations’s past year of commit activity
    HTML 9 5 0 0 Updated Sep 12, 2024
  • canlab.github.io Public
    canlab/canlab.github.io’s past year of commit activity
    HTML 3 MIT 0 0 7 Updated Sep 6, 2024
  • ooFmriDataObjML Public

    Object oriented ML framework for fmri_data objects

    canlab/ooFmriDataObjML’s past year of commit activity
    MATLAB 1 GPL-3.0 0 0 0 Updated Aug 23, 2024
  • canlab_single_trials Public

    A repository and data interface for MVPA education and model/algorithm development

    canlab/canlab_single_trials’s past year of commit activity
    MATLAB 2 GPL-3.0 1 0 0 Updated May 21, 2024
  • cognitive_regulation_physiology Public

    Data and scripts for Matthewson, Woo, & Wager (in prep)

    canlab/cognitive_regulation_physiology’s past year of commit activity
    HTML 3 GPL-3.0 2 0 0 Updated May 17, 2024
  • MediationToolbox Public

    Single-level and multi-level mediation analyses for any kind of data, with bootstrap-based significance testing. Neuroimaging-oriented functions allow for mediation effect parametric mapping (mapping of mediation effects across the brain) and multivariate mediation.

    canlab/MediationToolbox’s past year of commit activity
    HTML 82 29 23 0 Updated Mar 14, 2024
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