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It performs a search on PubMed looking for the <a
href="https://pubmed.ncbi.nlm.nih.gov/?term=agent-based+model&amp;sort=date"
target="_blank">latest papers about Agent-Based Models</a>. The last
update was on 2023-09-24 00:36:15.
update was on 2023-10-01 00:39:08.

<div class="cell">

</div>

1. **Study of vascular sclerosing agent based on the dual mechanism of
vascular endothelial cell damage-plasmin system inhibition.**

Ma J, Chen Y, Zhang K, Yang T, Xie H, Yang X, Ding P.

Biochem Biophys Res Commun. 2023 Sep 15;680:135-140. doi:
10.1016/j.bbrc.2023.09.035. Online ahead of print.

> In this study, we have developed a novel cationic surfactant-based
> sclerosing agent (POL-TA) by conjugating the plasmin inhibitor
> tranexamic acid (TA) with a nonionic surfactant polidocanol (POL)
> through an ester bond. …The inhibitory effects of POL-TA on the
> plas …
2. **Generalized morality culturally evolves as an adaptive heuristic
in large social networks.**

Jackson JC, Halberstadt J, Takezawa M, Liew K, Smith K, Apicella C,
Gray K.

J Pers Soc Psychol. 2023 Sep 21. doi: 10.1037/pspa0000358. Online
ahead of print.

> Why do we even use words like “moral” and “immoral”? We explore
> these questions with a new model of how people perceive moral
> character. We propose that people vary in the extent to which they
> perceive moral character as “localized” (varying along many
> contextually embedde …
1. **Inferring local molecular dynamics from the global actin network
structure: A case study of 2D synthetic branching actin networks.**

3. **Diverse mutant selection windows shape spatial heterogeneity in
evolving populations.**
Rostami MW, Bannish BE, Gasior K, Pinals RL, Copos C, Dawes AT.

King ES, Pierce B, Hinczewski M, Scott JG.

bioRxiv. 2023 Sep 6:2023.03.09.531899. doi:
10.1101/2023.03.09.531899. Preprint.

> In this work, we show how N -allele fitness seascapes allow for N
> 2 (N- 1) unique MSW comparisons. In spatial drug diffusion models,
> we demonstrate how fitness seascapes reveal spatially
> heterogeneous MSWs, extending the MSW model to more accurately
> reflect the sele …
J Theor Biol. 2023 Sep 27:111613. doi: 10.1016/j.jtbi.2023.111613.
Online ahead of print.

4. **The impact of preventive treatment for multidrug- and
rifampin-resistant tuberculosis exceeds trial-based estimates.**
> In this work, we investigate the microscale mechanisms that
> produce different branched actin network structures using an
> iterative classification approach. First, we employ a simple yet
> comprehensive agent-based model that produces synthetic actin
> networks wi …
Kasaie P, Pennington J, Gupta A, Dowdy DW, Kendall EA.
2. **An agent-based model of cardiac allograft vasculopathy: toward a
better understanding of chronic rejection dynamics.**

Clin Infect Dis. 2023 Sep 19:ciad557. doi: 10.1093/cid/ciad557.
Online ahead of print.
Serafini E, Corti A, Gallo D, Chiastra C, Li XC, Casarin S.

> The potential benefits of delivering TPT to MDR/RR-TB contacts
> extend beyond the outcomes that clinical trials can measure.
> METHODS: We developed an agent-based, household-structured TB and
> MDR/RR-TB transmission model, calibrated to an illustrative
> setting i …
Front Bioeng Biotechnol. 2023 Sep 12;11:1190409. doi:
10.3389/fbioe.2023.1190409. eCollection 2023.

5. **Policy evaluation of economic - environmental tradeoffs in
regulating industrial water use: An agent-based model.**
> The etiology and evolution of tissue pathology are largely
> unknown, making disease management challenging. So far, in vivo
> models, mostly mouse-based, have been widely used to study CAV,
> but they are resource-consuming, pose many ethical issues, and
> allow limited in …
Sun D, Zhang M, Jung D.
3. **A systematic review of the evaluation of agricultural policies:
Using prisma.**

J Environ Manage. 2023 Sep 16;346:118988. doi:
10.1016/j.jenvman.2023.118988. Online ahead of print.
Bastidas-Orrego LM, Jaramillo N, Castillo-Grisales JA, Ceballos YF.

> Therefore, scientifically regulating the water consumption and
> sewage discharge of industrial enterprises can effectively
> alleviate water scarcity and pollution problems. By establishing a
> multi-agent model, this study simulates the water use behavior of
> industrial …
Heliyon. 2023 Sep 20;9(10):e20292. doi:
10.1016/j.heliyon.2023.e20292. eCollection 2023 Oct.

6. **Minority-group incubators and majority-group reservoirs support
the diffusion of climate change adaptations.**
> Research shows that the latest policy evaluation proposals present
> more complex methodologies involving tools such as machine
> learning and agent-based modelling (ABM). On the other hand, the
> issue of sustainability as a policy is seen in the
> agri-environmenta …
Turner MA, Singleton AL, Harris MJ, Harryman I, Lopez CA, Arthur RF,
Muraida C, Jones JH.
4. **Towards genetic improvement of social behaviours in livestock
using large-scale sensor data: data simulation and genetic
analysis.**

Philos Trans R Soc Lond B Biol Sci. 2023 Nov 6;378(1889):20220401.
doi: 10.1098/rstb.2022.0401. Epub 2023 Sep 18.
Wang Z, Doekes H, Bijma P.

> Current theory suggests that the heterogeneity of metapopulation
> structure can help adaptations diffuse throughout a population. In
> this paper, we develop an agent-based model of the spread of
> adaptations in populations with minority-majority metapopulation s
> …
Genet Sel Evol. 2023 Sep 28;55(1):67. doi:
10.1186/s12711-023-00840-z.

7. **The impacts of climate change, energy policy and traditional
ecological practices on future firewood availability for Diné
(Navajo) People.**
> While these behaviours are heritable, selective breeding is still
> limited due to a lack of individual phenotyping methods for large
> groups and proper genetic models. In the near future, large-scale
> longitudinal data on social behaviours will become available,
> e.g. through …
Magargal K, Wilson K, Chee S, Campbell MJ, Bailey V, Dennison PE,
Anderegg WRL, Cachelin A, Brewer S, Codding BF.
5. **Bayesian inference on the Allee effect in cancer cell line
populations using time-lapse microscopy images.**

Philos Trans R Soc Lond B Biol Sci. 2023 Nov 6;378(1889):20220394.
doi: 10.1098/rstb.2022.0394. Epub 2023 Sep 18.
Lindwall G, Gerlee P.

> However, there are two acute problems: first, climate
> change-induced drought will diminish local sources of firewood;
> second, policies aimed at reducing reliance on
> greenhouse-gas-emitting energy sources may limit alternatives like
> coal for home use, thereby increasing firewood d …
J Theor Biol. 2023 Sep 26:111624. doi: 10.1016/j.jtbi.2023.111624.
Online ahead of print.

8. **Evolution of HIV virulence in response to disease-modifying
vaccines: A modeling study.**
> This is great interest to cancer research, as understanding
> critical tumour density thresholds can inform treatment plans for
> patients. In this paper, we introduce a simple model for cell
> division in the case where the cancer cell population is modelled
> as an intera …
Reid MC, Mittler JE, Murphy JT, Stansfield SE, Goodreau SM,
Abernethy N, Herbeck JT.
6. **Cell behaviors underlying Myxococcus xanthus aggregate
dispersal.**

Vaccine. 2023 Sep 13:S0264-410X(23)01027-7. doi:
10.1016/j.vaccine.2023.08.071. Online ahead of print.
Murphy P, Comstock J, Khan T, Zhang J, Welch R, Igoshin OA.

> We explored the potential for such virulence evolution with a
> disease-modifying HIV-1 vaccine in an agent-based stochastic
> epidemic model of HIV in United States men who have sex with men
> (MSM). In the model, vaccinated agents received no protection ag …
mSystems. 2023 Sep 25:e0042523. doi: 10.1128/msystems.00425-23.
Online ahead of print.

9. **Three-state opinion model with mobile agents.**
> The soil bacterium Myxococcus xanthus is a model organism with a
> set of diverse behaviors. These behaviors include the
> starvation-induced multicellular development program, in which
> cells move collectively to assemble multicellular aggregates. …We
> observe that after init …
7. **Digitize your Biology! Modeling multicellular systems through
interpretable cell behavior.**

Johnson JAI, Stein-O’Brien GL, Booth M, Heiland R, Kurtoglu F,
Bergman D, Bucher E, Deshpande A, Forjaz A, Getz M, Godet I, Lyman
M, Metzcar J, Mitchell J, Raddatz A, Rocha HL, Solorzano J, Sundus
A, Wang Y, Gilkes DM, Kagohara LT, Kiemen AL, Thompson ED, Wirtz D,
Wu PH, Zaidi N, Zheng L, Zimmerman JW, Jaffee EM, Chang YH, Coussens
L, Gray J, Heiser LM, Fertig EJ, Macklin P.

bioRxiv. 2023 Sep 24:2023.09.17.557982. doi:
10.1101/2023.09.17.557982. Preprint.

> Agent-based modeling is particularly well-suited to studying
> communities of interacting cells, as it is intuitive to map a
> single cell to a single agent. Thus, we have developed a
> conceptual framing (with a reference implementation in the
> widely-used P …
8. **The impact of subgroup-specific heterogeneities and dynamic
changes in mortality rates on forecasted population size, deaths and
age distribution of persons receiving antiretroviral treatment in
the United States: A computer simulation study.**

Kasaie P, Stewart C, Humes E, Gerace L, Hyle EP, Zalla LC, Rebeiro
PF, Silverberg MJ, Rubtsova AA, Rich AJ, Gebo K, Lesko CR, Fojo AT,
Lang R, Edwards JK, Althoff KN.

Ann Epidemiol. 2023 Sep 21:S1047-2797(23)00171-0. doi:
10.1016/j.annepidem.2023.09.005. Online ahead of print.

> BACKGROUND: Model-based forecasts of population size, deaths, and
> age distribution of people with HIV (PWH) are helpful for public
> health and clinical services planning but are influenced by
> subgroup-specific heterogeneities and changes in mortality rates.
> METHODS: …
9. **Study of vascular sclerosing agent based on the dual mechanism of
vascular endothelial cell damage-plasmin system inhibition.**

Ferri I, Gaya-Àvila A, Díaz-Guilera A.
Ma J, Chen Y, Zhang K, Yang T, Xie H, Yang X, Ding P.

Chaos. 2023 Sep 1;33(9):093121. doi: 10.1063/5.0152674.
Biochem Biophys Res Commun. 2023 Sep 15;680:135-140. doi:
10.1016/j.bbrc.2023.09.035. Online ahead of print.

> We study an agent-based opinion model with two extreme (opposite)
> opinion states and a neutral intermediate one. We adjust the
> relative degree of conviction between extremists and neutrals
> through a dimensionless parameter called the “neutrality
> parameter” to …
> In this study, we have developed a novel cationic surfactant-based
> sclerosing agent (POL-TA) by conjugating the plasmin inhibitor
> tranexamic acid (TA) with a nonionic surfactant polidocanol (POL)
> through an ester bond. …The inhibitory effects of POL-TA on the
> plas …
10. **Deconstructing the effects of stochasticity on transmission of
hospital-acquired infections in ICUs.**
10. **Generalized morality culturally evolves as an adaptive heuristic
in large social networks.**

Haghpanah F, Lin G, Klein E; CDC MInD-Healthcare Program.
Jackson JC, Halberstadt J, Takezawa M, Liew K, Smith K, Apicella C,
Gray K.

R Soc Open Sci. 2023 Sep 13;10(9):230277. doi: 10.1098/rsos.230277.
eCollection 2023 Sep.
J Pers Soc Psychol. 2023 Sep 21. doi: 10.1037/pspa0000358. Online
ahead of print.

> In this study, we investigated the impact of uncertainty
> (epistemic and aleatory) on nosocomial transmission of HAIs by
> evaluating the effects of stochasticity on the detectability of
> seasonality of admission prevalence. For doing so, we developed an
> agent-based …
> Why do we even use words like “moral” and “immoral”? We explore
> these questions with a new model of how people perceive moral
> character. We propose that people vary in the extent to which they
> perceive moral character as “localized” (varying along many
> contextually embedde …
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