Defines utility functions and iterator interface for OpenMendel genetic variant packages: SnpArrays.jl (PLINK 1 .bed
, .bim
, .fam
), VCFTools.jl (Variant Call Format .vcf
), BGEN.jl (Oxford BGEN .bgen
), and PGENFiles.jl (PLINK 2 .pgen
, .pvar
, .psam
). Intended to be used in GWAS packages (OrdinalGWAS.jl
, TrajGWAS.jl
, MendelGWAS.jl
(?)).
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OpenMendel/GeneticVariantBase.jl
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