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Extract small deidentified dataset for evaluating SDoH and Exposome vocabularies #332

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kzollove opened this issue Apr 12, 2024 · 2 comments
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@kzollove
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kzollove commented Apr 12, 2024

We want to define a population and external exposure

~18% of TM patients should have person level SDoH information

Start with available person level SDoH information and then select a related regional variable

For SDoH and for chemicals (separately)

  • Use vocabulary to define population (inclusion)
  • Use vocabulary to define exposure (covariate)
  • Attributes at individual and regional level
@kzollove kzollove self-assigned this Apr 12, 2024
@kzollove kzollove changed the title Kyle will extract small deidentified dataset for evaluating SDoH and Exposome vocabularies Extract small deidentified dataset for evaluating SDoH and Exposome vocabularies Apr 12, 2024
@kzollove
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  • Which SDoH Variables to use? Start with variable that we have at the region level (not an aggregated variable)... think measure of economic burden for individual vs measure of economic burden for region
  • Which "chemical" variables to use? Environment exposure that involves a chemical and a (potentially separate) chemical (drug) that appears in the EHR data (arsenic trioxide is a cancer drug... arsenic is a potential environmental toxicant)

@p-talapova
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Hi @kzollove
I hope the attached list of variables proves useful for the JOIN function and subsequent testing. Please let me know if you need any further details or adjustments.
SDOH-and-Exposome-Variables-For-Testing.csv

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