run engineering script, add dependencies

.gitignore

@@ -8,6 +8,7 @@
 *.DS_Store
 *.dbf
 *.shp
+*.txt
 
 # Files generated by invoking Julia with --code-coverage
 *.jl.cov

Project.toml

@@ -4,7 +4,27 @@ authors = ["Mauricio Lima, Andrew Chiang, Katherine Deck, Ollie Dunbar"]
 version = "0.1.0"
 
 [deps]
-JuliaFormatter = "98e50ef6-434e-11e9-1051-2b60c6c9e899"
+CSV = "336ed68f-0bac-5ca0-87d4-7b16caf5d00b"
+CUDA = "052768ef-5323-5732-b1bb-66c8b64840ba"
+CairoMakie = "13f3f980-e62b-5c42-98c6-ff1f3baf88f0"
+ColorSchemes = "35d6a980-a343-548e-a6ea-1d62b119f2f4"
+DSP = "717857b8-e6f2-59f4-9121-6e50c889abd2"
+DataFrames = "a93c6f00-e57d-5684-b7b6-d8193f3e46c0"
+Dates = "ade2ca70-3891-5945-98fb-dc099432e06a"
+Distributed = "8ba89e20-285c-5b6f-9357-94700520ee1b"
+Flux = "587475ba-b771-5e3f-ad9e-33799f191a9c"
+GeometryBasics = "5c1252a2-5f33-56bf-86c9-59e7332b4326"
+Graphs = "86223c79-3864-5bf0-83f7-82e725a168b6"
+JSON = "682c06a0-de6a-54ab-a142-c8b1cf79cde6"
+NCDatasets = "85f8d34a-cbdd-5861-8df4-14fed0d494ab"
+NetCDF = "30363a11-5582-574a-97bb-aa9a979735b9"
+ProgressMeter = "92933f4c-e287-5a05-a399-4b506db050ca"
+Random = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c"
+Shapefile = "8e980c4a-a4fe-5da2-b3a7-4b4b0353a2f4"
+SpecialFunctions = "276daf66-3868-5448-9aa4-cd146d93841b"
+Statistics = "10745b16-79ce-11e8-11f9-7d13ad32a3b2"
+TOML = "fa267f1f-6049-4f14-aa54-33bafae1ed76"
+cuDNN = "02a925ec-e4fe-4b08-9a7e-0d78e3d38ccd"
 
 [compat]
 julia = "1.10"

examples/routing_models/engineering/Config.toml

@@ -1,7 +1,7 @@
 # midway data is assumed to be already present
 
 [base]
-base = "/groups/esm/achiang/Rivers/data_from_sampo"
+base = "/groups/esm/achiang/ClimaRivers.jl/data"
 
 [level]
 hydro_lv = "05"

examples/routing_models/engineering/engineer_lv05.jl

@@ -1,4 +1,4 @@
-using Rivers
+using ClimaRivers
 using Dates
 using TOML
 

examples/routing_models/routing/LSTM-IRF/Config.toml

@@ -1,5 +1,5 @@
 [base]
-base = "/central/scratch/mdemoura/Rivers"
+base = "/groups/esm/achiang/ClimaRivers.jl/data"
 
 [level]
 hydro_lv = "05"

examples/routing_models/routing/gamma-IRF/Config.toml

@@ -1,5 +1,5 @@
 [base]
-base = "/groups/esm/achiang/Rivers/data_from_sampo"
+base = "/groups/esm/achiang/ClimaRivers.jl/data"
 
 [level]
 hydro_lv = "05"

examples/routing_models/routing/gamma-IRF/route_lv05.jl

@@ -4,7 +4,6 @@ include("../../../../src/routing/routing.jl")
 
 function main()
     # Unpack config
-    #examples/routing_models/routing/
     config = TOML.parsefile("examples/routing_models/routing/gamma-IRF/Config.toml")
     base = config["base"]["base"]
     hydro_lv = config["level"]["hydro_lv"]

src/ClimaRivers.jl

@@ -1,5 +1,44 @@
 module ClimaRivers
 
-greet() = print("Hello World!")
+export grid_points_to_basins, compute_basins_timeseries, merge_and_shift_grdc_files,
+       gauges_to_basins, caravan_to_basins, create_graph, merge_era5_grdc, attribute_attributes, 
+       select_uniques, extract_basin_lists, write_routing_levels, write_routing_timeseries,
+       write_routing_attributes
 
-end # module ClimaRivers
+export standard_longitudes! # used for plotting in the monte carlo example
+
+
+# engineering
+include("engineering/geo_utils.jl")
+
+include("engineering/grid_points_to_basins.jl")
+
+include("engineering/compute_basins_timeseries.jl")
+
+include("engineering/merge_and_shift_grdc_files.jl")
+
+include("engineering/gauges_to_basins.jl")
+
+include("engineering/caravan_to_basins.jl")
+
+include("engineering/create_graph.jl")
+
+include("engineering/merge_era5_grdc_single.jl")
+
+include("engineering/merge_era5_grdc_graph.jl")
+
+include("engineering/attribute_attributes_single.jl")
+
+include("engineering/attribute_attributes_graph.jl")
+
+include("engineering/select_uniques.jl")
+
+include("engineering/extract_basins.jl")
+
+include("engineering/write_routing_levels.jl")
+
+include("engineering/write_routing_timeseries.jl")
+
+include("engineering/write_routing_attributes.jl")
+
+end # Rivers module