TileDB-SOMA 1.14

[johnkerl]

Application-level blockers:

• Conda pre-check following our established procedure
  • tiledbsoma 1.14.0 pre-check TileDB-Inc/tiledbsoma-feedstock#199
• Write leak
  • [c++] Fix ManagedQuery usage in SOMAArray write path #2989
• Propagation of R context
  • [r,c++] Use SOMA Context object throughout #2997
• Index-remap corner case for enumerations:
  • [c++] Corner-case bug in extend-enumeration logic #2897
  • [c++] Remap indexes even if no new enums were added #2993
• Update ETAs for new shape, and tiledb-py deprecation:
  • [python/r] Update ETA for new-shape feature and tiledb-py removal #2998
• A post-deprecation removal
  • [python] Remove consolidate_and_vacuum from TileDBCreateOptions in 1.13 #2579
  • [python] Post-deprecation removal of consolidate_and_vacuum from TileDBCreateOptions #3000
• [c++/r] Fix pkgdown build errors #3003
• [python] Move temporary feature flag into a module #3005
• [r] Remove core version check #3006
• [python] Remove pyarrow pin on MacOS #3004
• Python 3.12 support
  • [Feature request] Python 3.12 support #1849
  • This will not be included in TileDB-SOMA 1.14.0 due to unexpected complications
    • [Feature request] Python 3.12 support #1849 (comment)
    • Work around various issues with Python 3.12 SOMA#222
    • [python] Python 3.12 support #3001

[johnkerl]

Blocked by single-cell-data/SOMA#222

[johnkerl]

https://github.com/single-cell-data/TileDB-SOMA/releases/tag/1.14.0