diff --git a/Makefile b/Makefile index 995262e71..3e95a0bef 100644 --- a/Makefile +++ b/Makefile @@ -143,8 +143,8 @@ LIBHTS_SOVERSION = 3 # is not strictly necessary and should be removed the next time # LIBHTS_SOVERSION is bumped (see #1144 and # https://developer.apple.com/library/archive/documentation/DeveloperTools/Conceptual/DynamicLibraries/100-Articles/DynamicLibraryDesignGuidelines.html#//apple_ref/doc/uid/TP40002013-SW23) -MACH_O_COMPATIBILITY_VERSION = 3.1.16 -MACH_O_CURRENT_VERSION = 3.1.16 +MACH_O_COMPATIBILITY_VERSION = 3.1.17 +MACH_O_CURRENT_VERSION = 3.1.17 # $(NUMERIC_VERSION) is for items that must have a numeric X.Y.Z string # even if this is a dirty or untagged Git working tree. diff --git a/NEWS b/NEWS index adaba256a..d2c168ee7 100644 --- a/NEWS +++ b/NEWS @@ -1,6 +1,9 @@ Noteworthy changes in release a.b ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +Noteworthy changes in release 1.17 (21st February 2023) +~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + * A new API for iterating through a BAM record's aux field. (PR#1354, addresses #1319. Thanks to John Marshall) diff --git a/bgzip.1 b/bgzip.1 index 235c72a48..abf9fcedb 100644 --- a/bgzip.1 +++ b/bgzip.1 @@ -1,4 +1,4 @@ -.TH bgzip 1 "18 August 2022" "htslib-1.16" "Bioinformatics tools" +.TH bgzip 1 "21 February 2023" "htslib-1.17" "Bioinformatics tools" .SH NAME .PP bgzip \- Block compression/decompression utility diff --git a/htsfile.1 b/htsfile.1 index cf87bef3d..9e0b0b603 100644 --- a/htsfile.1 +++ b/htsfile.1 @@ -1,4 +1,4 @@ -.TH htsfile 1 "18 August 2022" "htslib-1.16" "Bioinformatics tools" +.TH htsfile 1 "21 February 2023" "htslib-1.17" "Bioinformatics tools" .SH NAME htsfile \- identify high-throughput sequencing data files .\" diff --git a/htslib-s3-plugin.7 b/htslib-s3-plugin.7 index 7a8e51a9e..b37eacac3 100644 --- a/htslib-s3-plugin.7 +++ b/htslib-s3-plugin.7 @@ -1,4 +1,4 @@ -.TH htslib-s3-plugin 7 "18 August 2022" "htslib-1.16" "Bioinformatics tools" +.TH htslib-s3-plugin 7 "21 February 2023" "htslib-1.17" "Bioinformatics tools" .SH NAME s3 plugin \- htslib AWS S3 plugin .\" diff --git a/htslib.map b/htslib.map index bf25fd5d6..11411a6e3 100644 --- a/htslib.map +++ b/htslib.map @@ -608,3 +608,25 @@ HTSLIB_1.16 { cram_slice_hdr_get_num_blocks; hts_filter_eval2; } HTSLIB_1.15; + +HTSLIB_1.17 { + bam_aux_first; + bam_aux_next; + bam_aux_remove; + bcf_strerror; + cram_block_get_method; + cram_cid2ds_free; + cram_cid2ds_query; + cram_codec_describe; + cram_codec_get_content_ids; + cram_container_get_num_bases; + cram_container_get_num_records; + cram_decode_compression_header; + cram_describe_encodings; + cram_expand_method; + cram_free_compression_header; + cram_update_cid2ds_map; + fai_adjust_region; + fai_line_length; + faidx_seq_len64; +} HTSLIB_1.16; diff --git a/htslib/hts.h b/htslib/hts.h index a3e71ed05..9696bcd2c 100644 --- a/htslib/hts.h +++ b/htslib/hts.h @@ -489,7 +489,7 @@ const char *hts_version(void); // Immediately after release, bump ZZ to 90 to distinguish in-development // Git repository builds from the release; you may wish to increment this // further when significant features are merged. -#define HTS_VERSION 101690 +#define HTS_VERSION 101790 /*! @abstract Introspection on the features enabled in htslib * diff --git a/tabix.1 b/tabix.1 index cfbe30e28..ce5a47a39 100644 --- a/tabix.1 +++ b/tabix.1 @@ -1,4 +1,4 @@ -.TH tabix 1 "18 August 2022" "htslib-1.16" "Bioinformatics tools" +.TH tabix 1 "21 February 2023" "htslib-1.17" "Bioinformatics tools" .SH NAME .PP tabix \- Generic indexer for TAB-delimited genome position files diff --git a/version.sh b/version.sh index 89d57fcf6..65d1ccae6 100755 --- a/version.sh +++ b/version.sh @@ -24,7 +24,7 @@ # DEALINGS IN THE SOFTWARE. # Master version, for use in tarballs or non-git source copies -VERSION=1.16 +VERSION=1.17 # If we have a git clone, then check against the current tag srcdir=${0%/version.sh}