Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Extract to ImageJ modifies bit-depth (8-> 32) #34

Open
WillGiang opened this issue Jun 10, 2023 · 2 comments
Open

Extract to ImageJ modifies bit-depth (8-> 32) #34

WillGiang opened this issue Jun 10, 2023 · 2 comments

Comments

@WillGiang
Copy link

Using N5 Viewer's "Extract to ImageJ" after loading an 8-bit dataset leads to a 32-bit virtual stack.

Example dataset with uint8 data: s3://janelia-cosem-datasets/jrc_mus-liver/jrc_mus-liver.n5
image
image

@bogovicj
Copy link
Contributor

@WillGiang ,

Yup, I can reproduce this. Nice catch, thanks for reporting.

@bogovicj
Copy link
Contributor

The best fix for this will be to update a downstream dependency. This will work correctly after imglib/imglib2-ij#35 is merged and released.

Thanks again @WillGiang

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants