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@ejp-rd-vp EJP RD Pillar 2: Coordinated Access to Data and Services

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    62 repositories

    • vp-dp-frontend

      Public
      Vue
      •
      Apache License 2.0
      •0•0•15•5•Updated Oct 17, 2024Oct 17, 2024

    • vp-dp-backend

      Public
      Java
      •
      Apache License 2.0
      •2•0•2•1•Updated Oct 10, 2024Oct 10, 2024

    • FiaB

      Public
      FAIR IN A BOX
      Ruby
      •
      Apache License 2.0
      •2•4•2•0•Updated Sep 18, 2024Sep 18, 2024

    • CARE-SM-Implementation

      Public
      Repository dedicated to explore workflows for CARE-SM implementation
      MIT License
      •3•2•0•0•Updated Sep 13, 2024Sep 13, 2024

    • VP-Onboarding-Doc

      Public
      Python
      •1•0•1•0•Updated Sep 2, 2024Sep 2, 2024

    • resource-metadata-schema

      Public
      Metadata model and schemas for the EJP virtual platform
      metadataregistriesejprare-disease-registriesbiosample-registries
      Creative Commons Zero v1.0 Universal
      •10•14•4•1•Updated Aug 29, 2024Aug 29, 2024

    • CARE-Semantic-Model

      Public
      Clinical And Registries Entries Semantic Model
      MIT License
      •3•0•0•0•Updated Aug 27, 2024Aug 27, 2024

    • fdp-populator

      Public
      Populate FDP with content via github actions
      Python
      •
      MIT License
      •5•0•0•0•Updated Aug 26, 2024Aug 26, 2024

    • FDP-Reference-Implementation-Configuration

      Public
      A record of the process for configuring the Reference Implementation of the FAIR Data Point (the one that is included in FAIR-in-a-box) for use on the EJP-RD Virtual Platform
      Creative Commons Zero v1.0 Universal
      •2•4•0•0•Updated Aug 21, 2024Aug 21, 2024

    • VP-Labs

      Public
      Tools, configuration files, web pages, etc. that are used to run the VP testbed environment ("VP Labs")
      HTML
      •
      MIT License
      •0•0•0•0•Updated Aug 19, 2024Aug 19, 2024

    • resource-metadata-schema-ontology

      Public
      As part of the European Joint Programme (EJP) for Rare Diseases meta data standards (see https://github.com/ejp-rd-vp/resource-metadata-schema) have been developed for rare disease registries to describe their metadata that will improve the FAIR-ness of these resources. This repository defines the ontology that describes the resource metadata sc…
      Shell
      •
      MIT License
      •0•1•2•0•Updated Aug 19, 2024Aug 19, 2024

    • FAIR-EJP-Tests

      Public
      EJP-specific tests for the FAIR Evaluator
      Ruby
      •
      MIT License
      •0•0•0•0•Updated Aug 14, 2024Aug 14, 2024

    • yarrrml-rmlmapper-docker-ejp

      Public
      yarrrml-parser + rmlmapper-java in a Docker container.
      Shell
      •
      MIT License
      •2•1•0•0•Updated Aug 2, 2024Aug 2, 2024

    • CARE2OMOP

      Public
      Mapping CARE-SM to OMOP-CDM
      Mustache
      •1•0•0•0•Updated Aug 1, 2024Aug 1, 2024

    • DistributedAnalysisDemonstrator

      Public
      book available at
      Jupyter Notebook
      •1•0•2•1•Updated Jul 30, 2024Jul 30, 2024

    • DistributedAnalysis

      Public
      Repository for the Distributed Analysis
      MIT License
      •0•2•68•0•Updated Jul 1, 2024Jul 1, 2024

    • vp-api-specs

      Public
      API specification of VP
      Apache License 2.0
      •5•1•10•0•Updated May 29, 2024May 29, 2024

    • CDE-box-daemon

      Public
      The code that generates the Dockerized daemon used by CDE-in-a-box
      Ruby
      •
      MIT License
      •0•0•0•0•Updated Apr 20, 2024Apr 20, 2024

    • ejprd-federated-analysis

      Public
      0•1•0•0•Updated Apr 12, 2024Apr 12, 2024

    • beaconAPI4CARESM

      Public
      Python
      •2•0•0•0•Updated Mar 15, 2024Mar 15, 2024

    • Orphanet-Endpoint-API

      Public
      Orphanet mapping web services source code
      Java
      •
      MIT License
      •0•0•0•0•Updated Dec 17, 2023Dec 17, 2023

    • Document-based-FDP

      Public
      This repository contains information about the document-based FAIR Data Point, i.e., a set of files containing metadata according to the FDP specifications
      MIT License
      •0•0•1•0•Updated Dec 4, 2023Dec 4, 2023

    • fdp-beacon-proxy

      Public
      A proxy for the /catalog Beacon endpoint in order to query FAIR data point metadata
      HTML
      •
      MIT License
      •0•0•0•0•Updated Nov 28, 2023Nov 28, 2023

    • VP-Onboarding

      Public archive
      Your resource's complete guide to join the Virtual Platform
      0•0•0•0•Updated Nov 24, 2023Nov 24, 2023

    • CDE-semantic-model

      Public
      Semantic data model of the set of common data elements for rare disease registration
      fairfair-datardf-schemacommon-data-elementsrare-diseaserdf-model
      Creative Commons Zero v1.0 Universal
      •13•12•9•0•Updated Oct 26, 2023Oct 26, 2023

    • CDE-semantic-model-implementations

      Public
      This repository contains implementation artifacts related to CDE-semantic-model
      Ruby
      •8•2•3•0•Updated Oct 26, 2023Oct 26, 2023

    • vp-dp-resource-queries

      Public
      JavaScript
      •
      Apache License 2.0
      •0•0•0•0•Updated Aug 21, 2023Aug 21, 2023

    • vp-portal-issues

      Public
      0•0•15•0•Updated Aug 17, 2023Aug 17, 2023

    • query_builder_api

      Public
      This project focusses on the query builder API.
      openapi-specification
      GNU General Public License v3.0
      •1•2•0•0•Updated Jul 19, 2023Jul 19, 2023

    • vp-dp-genes-and-diseases

      Public
      Java
      •0•0•0•0•Updated Jul 5, 2023Jul 5, 2023