From eed82f142203e842a126b28796ff25e6e65c8ea8 Mon Sep 17 00:00:00 2001 From: Arwa Ibrahim <97462656+ar-ibrahim@users.noreply.github.com> Date: Thu, 31 Oct 2024 14:11:44 +0000 Subject: [PATCH] Added new 'age of onset' term --- src/ontology/imports/merged_import.owl | 1369 +++++++++---------- src/patterns/data/default/disease_onset.tsv | 1 + src/patterns/definitions.owl | 334 ++--- 3 files changed, 805 insertions(+), 899 deletions(-) diff --git a/src/ontology/imports/merged_import.owl b/src/ontology/imports/merged_import.owl index d04fbef3..47b82578 100644 --- a/src/ontology/imports/merged_import.owl +++ b/src/ontology/imports/merged_import.owl @@ -7,8 +7,8 @@ Prefix(rdfs:=) Ontology( - -Annotation(owl:versionInfo "2024-10-17") + +Annotation(owl:versionInfo "2024-10-31") Declaration(Class()) Declaration(Class()) @@ -22264,6 +22264,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -23468,6 +23469,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -23525,6 +23527,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -23559,6 +23562,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -23694,6 +23698,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -23824,6 +23829,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -24251,6 +24257,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -24366,6 +24373,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -24379,6 +24387,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -26134,9 +26143,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -31432,6 +31438,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -32000,6 +32007,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -32383,6 +32391,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -32615,7 +32624,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -33117,8 +33125,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -33143,15 +33149,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -33167,9 +33167,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -33811,6 +33808,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -34120,6 +34118,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -34576,8 +34575,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -34757,7 +34754,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -34818,7 +34814,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -34939,6 +34934,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -35119,7 +35115,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -35149,7 +35144,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -39514,7 +39508,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -40289,7 +40282,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -40441,6 +40433,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -42210,7 +42203,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -43939,7 +43931,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -45341,7 +45332,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -55243,7 +55233,7 @@ AnnotationAssertion(rdfs:label "caus SubObjectPropertyOf( ) SubObjectPropertyOf( ) -# Object Property: (disease causes disruption of) +# Object Property: (disease disrupts) AnnotationAssertion( "A relationship between a disease and a process where the disease process disrupts the execution of the process.") AnnotationAssertion(rdfs:label "disease causes disruption of") @@ -223874,6 +223864,12 @@ EquivalentClasses( ObjectIntersect SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (microcephaly) + +AnnotationAssertion(rdfs:label "microcephaly") +SubClassOf( ) +SubClassOf( ) + # Class: (tongue disorder) AnnotationAssertion(rdfs:label "tongue disorder") @@ -232686,6 +232682,14 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (congenital isolated adrenocorticotropic hormone deficiency) + +AnnotationAssertion(rdfs:label "congenital isolated adrenocorticotropic hormone deficiency") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (adrenocortical carcinoma, hereditary) AnnotationAssertion(rdfs:label "adrenocortical carcinoma, hereditary") @@ -233120,6 +233124,13 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (isolated dystonia) + +AnnotationAssertion(rdfs:label "isolated dystonia") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (hereditary endocrine growth disease) AnnotationAssertion(rdfs:label "hereditary endocrine growth disease") @@ -233358,6 +233369,14 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (isolated congenital hypogonadotropic hypogonadism) + +AnnotationAssertion(rdfs:label "isolated congenital hypogonadotropic hypogonadism") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (acquired ataxia) AnnotationAssertion(rdfs:label "acquired ataxia") @@ -234332,6 +234351,14 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (inherited isolated nail anomaly) + +AnnotationAssertion(rdfs:label "inherited isolated nail anomaly") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (skin pigmentation disorder) AnnotationAssertion(rdfs:label "skin pigmentation disorder") @@ -235280,6 +235307,11 @@ SubClassOf( "has a syndromic presentation") SubClassOf( ) +# Class: (has an isolated presentation) + +AnnotationAssertion(rdfs:label "has an isolated presentation") +SubClassOf( ) + # Class: (disorder of sphingolipid biosynthesis) AnnotationAssertion(rdfs:comment "Reason of obsoletion: out of scope - MONDO:excludeHistoricalDisease. Term to consider: -") @@ -238385,6 +238417,15 @@ SubClassOf( ObjectSomeValuesFrom(< AnnotationAssertion(rdfs:label "vitamin B deficiency") SubClassOf( ) +# Class: (isolated microcephaly) + +AnnotationAssertion(rdfs:label "isolated microcephaly") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (neurovascular disorder) AnnotationAssertion(rdfs:label "neurovascular disorder") @@ -239204,6 +239245,13 @@ SubClassOf( "disorder of peptide and amine metabolism") SubClassOf( ) +# Class: (Mendelian neurodevelopmental disorder) + +AnnotationAssertion(rdfs:label "Mendelian neurodevelopmental disorder") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + # Class: (fungal infection of the toenail) AnnotationAssertion(rdfs:label "fungal infection of the toenail") @@ -239290,6 +239338,11 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (neurodevelopmental disorder) + +AnnotationAssertion(rdfs:label "neurodevelopmental disorder") +SubClassOf( ) + # Class: (human disease) AnnotationAssertion(rdfs:label "human disease") @@ -246017,7 +246070,7 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "protein") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -247696,7 +247749,7 @@ SubClassOf( (interleukin-10) -AnnotationAssertion(rdfs:comment "Category=gene. Note: Active interleukin-10 inhibits the synthesis of a number of cytokines, including IFN-gamma, IL-2, IL-3, TNF and GM-CSF produced by activated macrophages and by helper T cells. Structurally, IL-10 is a protein of about 160 amino acids that contains four conserved cysteines involved in disulfide bonds.") +AnnotationAssertion(rdfs:comment "Category=gene.") AnnotationAssertion(rdfs:label "interleukin-10") SubClassOf( ) @@ -249056,26 +249109,6 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "lymphotactin") SubClassOf( ) -# Class: (CD14 molecule cleaved 1 soluble form) - -AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "CD14 molecule cleaved 1 soluble form") -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (CD14 molecule cleaved 2 soluble form) - -AnnotationAssertion(rdfs:comment "Category=modification. Note: This form appears to derive from release of the GPI-anchored form, mCD14.") -AnnotationAssertion(rdfs:label "CD14 molecule cleaved 2 soluble form") -SubClassOf( ) - -# Class: (CD14 molecule cleaved 2 GPI-anchored form) - -AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "CD14 molecule cleaved 2 GPI-anchored form") -SubClassOf( ) - # Class: (NAD(P)(+)--arginine ADP-ribosyltransferase) AnnotationAssertion(rdfs:comment "Category=family.") @@ -250702,10 +250735,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "retinal dehydrogenase 2") SubClassOf( ) -# Class: (retinaldehyde dehydrogenase 3) +# Class: (aldehyde dehydrogenase family 1 member A3) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "retinaldehyde dehydrogenase 3") +AnnotationAssertion(rdfs:label "aldehyde dehydrogenase family 1 member A3") SubClassOf( ) # Class: (aldehyde dehydrogenase X, mitochondrial) @@ -250732,10 +250765,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "succinate-semialdehyde dehydrogenase, mitochondrial") SubClassOf( ) -# Class: (methylmalonate-semialdehyde/malonate-semialdehyde dehydrogenase [acylating], mitochondrial) +# Class: (methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "methylmalonate-semialdehyde/malonate-semialdehyde dehydrogenase [acylating], mitochondrial") +AnnotationAssertion(rdfs:label "methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial") SubClassOf( ) # Class: (alpha-aminoadipic semialdehyde dehydrogenase) @@ -256870,10 +256903,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "transcription factor E2F5") SubClassOf( ) -# Class: (ciliary microtubule inner protein 4) +# Class: (testis-expressed protein 33) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "ciliary microtubule inner protein 4") +AnnotationAssertion(rdfs:label "testis-expressed protein 33") SubClassOf( ) # Class: (receptor-binding cancer antigen expressed on SiSo cells) @@ -256912,10 +256945,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "extracellular matrix protein 1") SubClassOf( ) -# Class: (WW domain binding protein VOPP1) +# Class: (vesicular, overexpressed in cancer, prosurvival protein 1) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "WW domain binding protein VOPP1") +AnnotationAssertion(rdfs:label "vesicular, overexpressed in cancer, prosurvival protein 1") SubClassOf( ) # Class: (endothelial cell-specific chemotaxis regulator) @@ -257026,10 +257059,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "embryonal Fyn-associated substrate") SubClassOf( ) -# Class: (pre-pro-epidermal growth factor) +# Class: (pro-epidermal growth factor) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "pre-pro-epidermal growth factor") +AnnotationAssertion(rdfs:label "pro-epidermal growth factor") SubClassOf( ) # Class: (protein eyes shut) @@ -257146,10 +257179,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "eukaryotic translation initiation factor 2-alpha kinase 3") SubClassOf( ) -# Class: (translation initiation factor eIF2B subunit alpha) +# Class: (translation initiation factor eIF-2B subunit alpha) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "translation initiation factor eIF2B subunit alpha") +AnnotationAssertion(rdfs:label "translation initiation factor eIF-2B subunit alpha") SubClassOf( ) # Class: (protein argonaute-1) @@ -257854,10 +257887,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "exosome complex component CSL4") SubClassOf( ) -# Class: (exosome complex component 10) +# Class: (exosome component 10) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "exosome complex component 10") +AnnotationAssertion(rdfs:label "exosome component 10") SubClassOf( ) # Class: (exosome complex component RRP40) @@ -258022,10 +258055,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "Fas apoptotic inhibitory molecule 1") SubClassOf( ) -# Class: (immunoglobulin mu Fc receptor) +# Class: (Fas apoptotic inhibitory molecule 3) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "immunoglobulin mu Fc receptor") +AnnotationAssertion(rdfs:label "Fas apoptotic inhibitory molecule 3") SubClassOf( ) # Class: (Fanconi anemia group F protein) @@ -258952,10 +258985,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "growth arrest and DNA damage-inducible protein GADD45 beta") SubClassOf( ) -# Class: (large ribosomal subunit protein mL64) +# Class: (growth arrest and DNA damage-inducible proteins-interacting protein 1) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein mL64") +AnnotationAssertion(rdfs:label "growth arrest and DNA damage-inducible proteins-interacting protein 1") SubClassOf( ) # Class: (G antigen 2B/2C) @@ -259661,10 +259694,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "guanine nucleotide-binding protein G(q) subunit alpha") SubClassOf( ) -# Class: (small ribosomal subunit protein RACK1) +# Class: (receptor of activated protein C kinase 1) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "small ribosomal subunit protein RACK1") +AnnotationAssertion(rdfs:label "receptor of activated protein C kinase 1") SubClassOf( ) # Class: (bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase) @@ -260447,10 +260480,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "E3 ubiquitin-protein ligase HECW2") SubClassOf( ) -# Class: (hepatic and glial cell adhesion molecule) +# Class: (hepatocyte cell adhesion molecule) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "hepatic and glial cell adhesion molecule") +AnnotationAssertion(rdfs:label "hepatocyte cell adhesion molecule") SubClassOf( ) # Class: (hephaestin) @@ -260561,10 +260594,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "hedgehog-interacting protein") SubClassOf( ) -# Class: (putative uncharacterized protein ANKRD13C-DT) +# Class: (HERV-H LTR-associating protein 3) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "putative uncharacterized protein ANKRD13C-DT") +AnnotationAssertion(rdfs:label "HERV-H LTR-associating protein 3") SubClassOf( ) # Class: (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial) @@ -264545,106 +264578,106 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "rRNA methyltransferase 1, mitochondrial") SubClassOf( ) -# Class: (large ribosomal subunit protein uL1m) +# Class: (39S ribosomal protein L1, mitochondrial) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL1m") +AnnotationAssertion(rdfs:label "39S ribosomal protein L1, mitochondrial") SubClassOf( ) -# Class: (large ribosomal subunit protein uL10m) +# Class: (39S ribosomal protein L10, mitochondrial) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL10m") +AnnotationAssertion(rdfs:label "39S ribosomal protein L10, mitochondrial") SubClassOf( ) -# Class: (large ribosomal subunit protein bL12m) +# Class: (39S ribosomal protein L12, mitochondrial) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein bL12m") +AnnotationAssertion(rdfs:label "39S ribosomal protein L12, mitochondrial") SubClassOf( ) -# Class: (large ribosomal subunit protein uL14m) +# Class: (39S ribosomal protein L14, mitochondrial) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL14m") +AnnotationAssertion(rdfs:label "39S ribosomal protein L14, mitochondrial") SubClassOf( ) -# Class: (large ribosomal subunit protein uL2m) +# Class: (39S ribosomal protein L2, mitochondrial) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL2m") +AnnotationAssertion(rdfs:label "39S ribosomal protein L2, mitochondrial") SubClassOf( ) -# Class: (large ribosomal subunit protein bL21m) +# Class: (39S ribosomal protein L21, mitochondrial) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein bL21m") +AnnotationAssertion(rdfs:label "39S ribosomal protein L21, mitochondrial") SubClassOf( ) -# Class: (large ribosomal subunit protein uL24m) +# Class: (39S ribosomal protein L24, mitochondrial) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL24m") +AnnotationAssertion(rdfs:label "39S ribosomal protein L24, mitochondrial") SubClassOf( ) -# Class: (large ribosomal subunit protein bL28m) +# Class: (39S ribosomal protein L28, mitochondrial) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein bL28m") +AnnotationAssertion(rdfs:label "39S ribosomal protein L28, mitochondrial") SubClassOf( ) -# Class: (large ribosomal subunit protein bL32m) +# Class: (39S ribosomal protein L32, mitochondrial) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein bL32m") +AnnotationAssertion(rdfs:label "39S ribosomal protein L32, mitochondrial") SubClassOf( ) -# Class: (large ribosomal subunit protein bL33m) +# Class: (39S ribosomal protein L33, mitochondrial) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein bL33m") +AnnotationAssertion(rdfs:label "39S ribosomal protein L33, mitochondrial") SubClassOf( ) -# Class: (large ribosomal subunit protein bL34m) +# Class: (39S ribosomal protein L34, mitochondrial) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein bL34m") +AnnotationAssertion(rdfs:label "39S ribosomal protein L34, mitochondrial") SubClassOf( ) -# Class: (large ribosomal subunit protein mL38) +# Class: (39S ribosomal protein L38, mitochondrial) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein mL38") +AnnotationAssertion(rdfs:label "39S ribosomal protein L38, mitochondrial") SubClassOf( ) -# Class: (large ribosomal subunit protein mL46) +# Class: (39S ribosomal protein L46, mitochondrial) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein mL46") +AnnotationAssertion(rdfs:label "39S ribosomal protein L46, mitochondrial") SubClassOf( ) -# Class: (large ribosomal subunit protein mL52) +# Class: (39S ribosomal protein L52, mitochondrial) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein mL52") +AnnotationAssertion(rdfs:label "39S ribosomal protein L52, mitochondrial") SubClassOf( ) -# Class: (large ribosomal subunit protein mL55) +# Class: (39S ribosomal protein L55, mitochondrial) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein mL55") +AnnotationAssertion(rdfs:label "39S ribosomal protein L55, mitochondrial") SubClassOf( ) -# Class: (small ribosomal subunit protein uS14m) +# Class: (28S ribosomal protein S14, mitochondrial) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "small ribosomal subunit protein uS14m") +AnnotationAssertion(rdfs:label "28S ribosomal protein S14, mitochondrial") SubClassOf( ) -# Class: (small ribosomal subunit protein bS16m) +# Class: (28S ribosomal protein S16, mitochondrial) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "small ribosomal subunit protein bS16m") +AnnotationAssertion(rdfs:label "28S ribosomal protein S16, mitochondrial") SubClassOf( ) # Class: (ribosome-recycling factor, mitochondrial) @@ -265343,10 +265376,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "nucleolin") SubClassOf( ) -# Class: (BOS complex subunit NCLN) +# Class: (nicalin) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "BOS complex subunit NCLN") +AnnotationAssertion(rdfs:label "nicalin") SubClassOf( ) # Class: (nuclear receptor coactivator 2) @@ -265895,16 +265928,16 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "nicotinamide N-methyltransferase") SubClassOf( ) -# Class: (BOS complex subunit NOMO1) +# Class: (nodal modulator 1) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "BOS complex subunit NOMO1") +AnnotationAssertion(rdfs:label "nodal modulator 1") SubClassOf( ) -# Class: (BOS complex subunit NOMO2) +# Class: (nodal modulator 2) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "BOS complex subunit NOMO2") +AnnotationAssertion(rdfs:label "nodal modulator 2") SubClassOf( ) # Class: (non-POU domain-containing octamer-binding protein) @@ -265925,16 +265958,16 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "nucleolar protein 56") SubClassOf( ) -# Class: (nitric oxide synthase 1) +# Class: (nitric oxide synthase, brain) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "nitric oxide synthase 1") +AnnotationAssertion(rdfs:label "nitric oxide synthase, brain") SubClassOf( ) -# Class: (nitric oxide synthase 3) +# Class: (nitric oxide synthase, endothelial) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "nitric oxide synthase 3") +AnnotationAssertion(rdfs:label "nitric oxide synthase, endothelial") SubClassOf( ) # Class: (nitric oxide synthase-interacting protein) @@ -266129,10 +266162,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "nuclear receptor 2C2-associated protein") SubClassOf( ) -# Class: (nuclear receptor subfamily 4 immunity group A member 1) +# Class: (nuclear receptor subfamily 4 group A member 1) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "nuclear receptor subfamily 4 immunity group A member 1") +AnnotationAssertion(rdfs:label "nuclear receptor subfamily 4 group A member 1") SubClassOf( ) # Class: (nuclear receptor subfamily 5 group A member 2) @@ -267461,16 +267494,16 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C") SubClassOf( ) -# Class: (3',5'-cyclic-AMP phosphodiesterase 4A) +# Class: (cAMP-specific 3',5'-cyclic phosphodiesterase 4A) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "3',5'-cyclic-AMP phosphodiesterase 4A") +AnnotationAssertion(rdfs:label "cAMP-specific 3',5'-cyclic phosphodiesterase 4A") SubClassOf( ) -# Class: (3',5'-cyclic-AMP phosphodiesterase 4C) +# Class: (cAMP-specific 3',5'-cyclic phosphodiesterase 4C) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "3',5'-cyclic-AMP phosphodiesterase 4C") +AnnotationAssertion(rdfs:label "cAMP-specific 3',5'-cyclic phosphodiesterase 4C") SubClassOf( ) # Class: (retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta) @@ -268854,10 +268887,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "palmitoyl-protein thioesterase 1") SubClassOf( ) -# Class: (pancreatic polypeptide prohormone) +# Class: (pancreatic prohormone) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "pancreatic polypeptide prohormone") +AnnotationAssertion(rdfs:label "pancreatic prohormone") SubClassOf( ) # Class: (polyglutamine-binding protein 1) @@ -270360,10 +270393,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "regulator of chromosome condensation") SubClassOf( ) -# Class: (5-hydroxymethyl-dUMP N-hydrolase) +# Class: (2'-deoxynucleoside 5'-phosphate N-hydrolase 1) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "5-hydroxymethyl-dUMP N-hydrolase") +AnnotationAssertion(rdfs:label "2'-deoxynucleoside 5'-phosphate N-hydrolase 1") SubClassOf( ) # Class: (reticulocalbin-3) @@ -270462,11 +270495,11 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "regenerating islet-derived protein 3-alpha") SubClassOf( ) -# Class: (obsolete regenerating islet-derived protein 3-gamma) +# Class: (regenerating islet-derived protein 3-gamma) -AnnotationAssertion(rdfs:comment "Category (was) gene. Made obsolete because this is one of a set of paralogs (that is, no 1:1 orthology is possible). Had archetype PR:Q6UW15.") -AnnotationAssertion(rdfs:label "obsolete regenerating islet-derived protein 3-gamma") -AnnotationAssertion(owl:deprecated "true"^^xsd:boolean) +AnnotationAssertion(rdfs:comment "Category=gene.") +AnnotationAssertion(rdfs:label "regenerating islet-derived protein 3-gamma") +SubClassOf( ) # Class: (transcription factor RelB) @@ -271080,52 +271113,52 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "ribose-5-phosphate isomerase") SubClassOf( ) -# Class: (eukaryotic-type large ribosomal subunit protein uL5) +# Class: (60S ribosomal protein L11) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "eukaryotic-type large ribosomal subunit protein uL5") +AnnotationAssertion(rdfs:label "60S ribosomal protein L11") SubClassOf( ) -# Class: (eukaryotic-type large ribosomal subunit protein uL11) +# Class: (60S ribosomal protein L12) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "eukaryotic-type large ribosomal subunit protein uL11") +AnnotationAssertion(rdfs:label "60S ribosomal protein L12") SubClassOf( ) -# Class: (large ribosomal subunit protein eL14) +# Class: (60S ribosomal protein L14) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein eL14") +AnnotationAssertion(rdfs:label "60S ribosomal protein L14") SubClassOf( ) -# Class: (ribosomal protein uL24-like) +# Class: (60S ribosomal protein L26-like 1) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "ribosomal protein uL24-like") +AnnotationAssertion(rdfs:label "60S ribosomal protein L26-like 1") SubClassOf( ) -# Class: (large ribosomal subunit protein eL30) +# Class: (60S ribosomal protein L30) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein eL30") +AnnotationAssertion(rdfs:label "60S ribosomal protein L30") SubClassOf( ) -# Class: (large ribosomal subunit protein eL38) +# Class: (60S ribosomal protein L38) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein eL38") +AnnotationAssertion(rdfs:label "60S ribosomal protein L38") SubClassOf( ) -# Class: (eukaryotic-type large ribosomal subunit protein uL18) +# Class: (60S ribosomal protein L5) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "eukaryotic-type large ribosomal subunit protein uL18") +AnnotationAssertion(rdfs:label "60S ribosomal protein L5") SubClassOf( ) -# Class: (large ribosomal subunit protein P2) +# Class: (60S acidic ribosomal protein P2) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein P2") +AnnotationAssertion(rdfs:label "60S acidic ribosomal protein P2") SubClassOf( ) # Class: (dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2) @@ -271158,58 +271191,58 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "regulation of nuclear pre-mRNA domain-containing protein 1A") SubClassOf( ) -# Class: (small ribosomal subunit protein eS10) +# Class: (40S ribosomal protein S10) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS10") +AnnotationAssertion(rdfs:label "40S ribosomal protein S10") SubClassOf( ) -# Class: (small ribosomal subunit protein eS12) +# Class: (40S ribosomal protein S12) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS12") +AnnotationAssertion(rdfs:label "40S ribosomal protein S12") SubClassOf( ) -# Class: (eukaryotic-type small ribosomal subunit protein uS11) +# Class: (40S ribosomal protein S14) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "eukaryotic-type small ribosomal subunit protein uS11") +AnnotationAssertion(rdfs:label "40S ribosomal protein S14") SubClassOf( ) -# Class: (small ribosomal subunit protein eS19) +# Class: (40S ribosomal protein S19) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS19") +AnnotationAssertion(rdfs:label "40S ribosomal protein S19") SubClassOf( ) -# Class: (eukaryotic-type small ribosomal subunit protein uS10) +# Class: (40S ribosomal protein S20) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "eukaryotic-type small ribosomal subunit protein uS10") +AnnotationAssertion(rdfs:label "40S ribosomal protein S20") SubClassOf( ) -# Class: (small ribosomal subunit protein eS25) +# Class: (40S ribosomal protein S25) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS25") +AnnotationAssertion(rdfs:label "40S ribosomal protein S25") SubClassOf( ) -# Class: (small ribosomal subunit protein eS1) +# Class: (40S ribosomal protein S3a) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS1") +AnnotationAssertion(rdfs:label "40S ribosomal protein S3a") SubClassOf( ) -# Class: (small ribosomal subunit protein eS4, X isoform) +# Class: (40S ribosomal protein S4, X isoform) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS4, X isoform") +AnnotationAssertion(rdfs:label "40S ribosomal protein S4, X isoform") SubClassOf( ) -# Class: (eukaryotic-type small ribosomal subunit protein uS7) +# Class: (40S ribosomal protein S5) AnnotationAssertion(rdfs:comment "Category=gene. Pro-orthology refers to, in this case, after-speciation gene duplication in the non-human species (aka 1:many orthology).") -AnnotationAssertion(rdfs:label "eukaryotic-type small ribosomal subunit protein uS7") +AnnotationAssertion(rdfs:label "40S ribosomal protein S5") SubClassOf( ) # Class: (ribosomal protein S6 kinase alpha-1) @@ -272574,10 +272607,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "ski-like protein") SubClassOf( ) -# Class: (superkiller complex protein 2) +# Class: (SKI2 subunit of superkiller complex protein) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "superkiller complex protein 2") +AnnotationAssertion(rdfs:label "SKI2 subunit of superkiller complex protein") SubClassOf( ) # Class: (S-phase kinase-associated protein 2) @@ -272730,10 +272763,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "zinc transporter ZIP5") SubClassOf( ) -# Class: (amino acid transporter heavy chain SLC3A1) +# Class: (neutral and basic amino acid transport protein rBAT) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "amino acid transporter heavy chain SLC3A1") +AnnotationAssertion(rdfs:label "neutral and basic amino acid transport protein rBAT") SubClassOf( ) # Class: (solute carrier family 41 member 2) @@ -273318,10 +273351,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "spermatogenesis-associated protein 22") SubClassOf( ) -# Class: (ATPase family gene 2 protein homolog A) +# Class: (ribosome biogenesis protein SPATA5) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "ATPase family gene 2 protein homolog A") +AnnotationAssertion(rdfs:label "ribosome biogenesis protein SPATA5") SubClassOf( ) # Class: (spermatogenesis-associated protein 9) @@ -275808,10 +275841,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "testis-specific Y-encoded-like protein 1") SubClassOf( ) -# Class: (U5 small nuclear ribonucleoprotein TSSC4) +# Class: (protein TSSC4) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "U5 small nuclear ribonucleoprotein TSSC4") +AnnotationAssertion(rdfs:label "protein TSSC4") SubClassOf( ) # Class: (testis-specific serine/threonine-protein kinase 1) @@ -276738,10 +276771,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "vitamin D3 receptor") SubClassOf( ) -# Class: (vascular endothelial growth factor A, long form) +# Class: (vascular endothelial growth factor A) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "vascular endothelial growth factor A, long form") +AnnotationAssertion(rdfs:label "vascular endothelial growth factor A") SubClassOf( ) # Class: (vascular endothelial growth factor C) @@ -279749,10 +279782,10 @@ EquivalentClasses( ObjectIntersecti SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (retinaldehyde dehydrogenase 3, initiator methionine removed form) +# Class: (aldehyde dehydrogenase family 1 member A3, initiator methionine removed form) AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "retinaldehyde dehydrogenase 3, initiator methionine removed form") +AnnotationAssertion(rdfs:label "aldehyde dehydrogenase family 1 member A3, initiator methionine removed form") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -282041,6 +282074,15 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (pro-epidermal growth factor proteolytic cleavage product) + +AnnotationAssertion(rdfs:comment "Category=modification.") +AnnotationAssertion(rdfs:label "pro-epidermal growth factor proteolytic cleavage product") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (epidermal growth factor receptor, signal peptide removed form) AnnotationAssertion(rdfs:comment "Category=modification.") @@ -283061,10 +283103,10 @@ EquivalentClasses( ObjectIntersecti SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (small ribosomal subunit protein RACK1, initiator methionine removed form) +# Class: (receptor of activated protein C kinase 1, initiator methionine removed form) AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "small ribosomal subunit protein RACK1, initiator methionine removed form") +AnnotationAssertion(rdfs:label "receptor of activated protein C kinase 1, initiator methionine removed form") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -285183,10 +285225,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (nitric oxide synthase 3, initiator methionine removed form) +# Class: (nitric oxide synthase, endothelial, initiator methionine removed form) AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "nitric oxide synthase 3, initiator methionine removed form") +AnnotationAssertion(rdfs:label "nitric oxide synthase, endothelial, initiator methionine removed form") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -286147,18 +286189,18 @@ EquivalentClasses( ObjectIntersecti SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (pancreatic polypeptide prohormone, signal peptide removed form) +# Class: (pancreatic prohormone, signal peptide removed form) AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "pancreatic polypeptide prohormone, signal peptide removed form") +AnnotationAssertion(rdfs:label "pancreatic prohormone, signal peptide removed form") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (pancreatic polypeptide prohormone proteolytic cleavage product) +# Class: (pancreatic prohormone proteolytic cleavage product) AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "pancreatic polypeptide prohormone proteolytic cleavage product") +AnnotationAssertion(rdfs:label "pancreatic prohormone proteolytic cleavage product") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -286730,6 +286772,14 @@ EquivalentClasses( ObjectIntersecti SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (regenerating islet-derived protein 3-gamma, signal peptide removed form) + +AnnotationAssertion(rdfs:comment "Category=modification.") +AnnotationAssertion(rdfs:label "regenerating islet-derived protein 3-gamma, signal peptide removed form") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (tumor necrosis factor receptor superfamily member 19L, signal peptide removed form) AnnotationAssertion(rdfs:comment "Category=modification.") @@ -286812,26 +286862,26 @@ EquivalentClasses( ObjectIntersecti SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (eukaryotic-type large ribosomal subunit protein uL5, initiator methionine removed form) +# Class: (60S ribosomal protein L11, initiator methionine removed form) AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "eukaryotic-type large ribosomal subunit protein uL5, initiator methionine removed form") +AnnotationAssertion(rdfs:label "60S ribosomal protein L11, initiator methionine removed form") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein eL14, initiator methionine removed form) +# Class: (60S ribosomal protein L14, initiator methionine removed form) AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein eL14, initiator methionine removed form") +AnnotationAssertion(rdfs:label "60S ribosomal protein L14, initiator methionine removed form") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (eukaryotic-type large ribosomal subunit protein uL18, initiator methionine removed form) +# Class: (60S ribosomal protein L5, initiator methionine removed form) AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "eukaryotic-type large ribosomal subunit protein uL18, initiator methionine removed form") +AnnotationAssertion(rdfs:label "60S ribosomal protein L5, initiator methionine removed form") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -286852,66 +286902,66 @@ EquivalentClasses( ObjectIntersecti SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (small ribosomal subunit protein eS12, initiator methionine removed form) +# Class: (40S ribosomal protein S12, initiator methionine removed form) AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS12, initiator methionine removed form") +AnnotationAssertion(rdfs:label "40S ribosomal protein S12, initiator methionine removed form") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (eukaryotic-type small ribosomal subunit protein uS11, initiator methionine removed form) +# Class: (40S ribosomal protein S14, initiator methionine removed form) AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "eukaryotic-type small ribosomal subunit protein uS11, initiator methionine removed form") +AnnotationAssertion(rdfs:label "40S ribosomal protein S14, initiator methionine removed form") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (small ribosomal subunit protein eS19, initiator methionine removed form) +# Class: (40S ribosomal protein S19, initiator methionine removed form) AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS19, initiator methionine removed form") +AnnotationAssertion(rdfs:label "40S ribosomal protein S19, initiator methionine removed form") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (eukaryotic-type small ribosomal subunit protein uS10, initiator methionine removed form) +# Class: (40S ribosomal protein S20, initiator methionine removed form) AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "eukaryotic-type small ribosomal subunit protein uS10, initiator methionine removed form") +AnnotationAssertion(rdfs:label "40S ribosomal protein S20, initiator methionine removed form") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (small ribosomal subunit protein eS1, initiator methionine removed form) +# Class: (40S ribosomal protein S3a, initiator methionine removed form) AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS1, initiator methionine removed form") +AnnotationAssertion(rdfs:label "40S ribosomal protein S3a, initiator methionine removed form") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (small ribosomal subunit protein eS4, X isoform, initiator methionine removed form) +# Class: (40S ribosomal protein S4, X isoform, initiator methionine removed form) AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS4, X isoform, initiator methionine removed form") +AnnotationAssertion(rdfs:label "40S ribosomal protein S4, X isoform, initiator methionine removed form") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (eukaryotic-type small ribosomal subunit protein uS7, initiator methionine removed form) +# Class: (40S ribosomal protein S5, initiator methionine removed form) AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "eukaryotic-type small ribosomal subunit protein uS7, initiator methionine removed form") +AnnotationAssertion(rdfs:label "40S ribosomal protein S5, initiator methionine removed form") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (eukaryotic-type small ribosomal subunit protein uS7 proteolytic cleavage product) +# Class: (40S ribosomal protein S5 proteolytic cleavage product) AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "eukaryotic-type small ribosomal subunit protein uS7 proteolytic cleavage product") +AnnotationAssertion(rdfs:label "40S ribosomal protein S5 proteolytic cleavage product") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -288294,10 +288344,10 @@ EquivalentClasses( ObjectIntersecti SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (vascular endothelial growth factor A, long form, signal peptide removed form) +# Class: (vascular endothelial growth factor A, signal peptide removed form) AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "vascular endothelial growth factor A, long form, signal peptide removed form") +AnnotationAssertion(rdfs:label "vascular endothelial growth factor A, signal peptide removed form") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -289434,10 +289484,10 @@ EquivalentClasses( ObjectIntersecti SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (ribosomal protein uL24-like, initiator methionine removed form) +# Class: (60S ribosomal protein L26-like 1, initiator methionine removed form) AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "ribosomal protein uL24-like, initiator methionine removed form") +AnnotationAssertion(rdfs:label "60S ribosomal protein L26-like 1, initiator methionine removed form") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -289784,6 +289834,15 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (proteasome subunit alpha type-7, initiator methionine removed form (human)) + +AnnotationAssertion(rdfs:comment "Category=organism-modification.") +AnnotationAssertion(rdfs:label "proteasome subunit alpha type-7, initiator methionine removed form (human)") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (proteasome subunit beta type-3, initiator methionine removed form (human)) AnnotationAssertion(rdfs:comment "Category=organism-modification.") @@ -290460,10 +290519,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "ER membrane protein complex subunit 4") SubClassOf( ) -# Class: (EEIG family member 2) +# Class: (protein FAM102B) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "EEIG family member 2") +AnnotationAssertion(rdfs:label "protein FAM102B") SubClassOf( ) # Class: (protein FAM118B) @@ -291291,15 +291350,6 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "protein-glutamine gamma-glutamyltransferase") SubClassOf( ) -# Class: (CD14 molecule cleaved 2 soluble form (mouse)) - -AnnotationAssertion(rdfs:comment "Category=organism-modification.") -AnnotationAssertion(rdfs:label "CD14 molecule cleaved 2 soluble form (mouse)") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (A-kinase anchor protein 7 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") @@ -291546,10 +291596,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "transmembrane protein 119") SubClassOf( ) -# Class: (metabotropic glycine receptor) +# Class: (probable G-protein coupled receptor 158) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "metabotropic glycine receptor") +AnnotationAssertion(rdfs:label "probable G-protein coupled receptor 158") SubClassOf( ) # Class: (protein FAM162A) @@ -291690,10 +291740,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "C4b-binding protein alpha chain") SubClassOf( ) -# Class: (cell surface hyaluronidase CEMIP2) +# Class: (cell surface hyaluronidase) -AnnotationAssertion(rdfs:comment "Category=gene. Note: The human CEMIP2 is not active as a hyaluronidase, however the mouse ortholog is.") -AnnotationAssertion(rdfs:label "cell surface hyaluronidase CEMIP2") +AnnotationAssertion(rdfs:comment "Category=gene.") +AnnotationAssertion(rdfs:label "cell surface hyaluronidase") SubClassOf( ) # Class: (ER membrane protein complex subunit 1) @@ -291744,10 +291794,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "leucine-rich repeat-containing protein 38") SubClassOf( ) -# Class: (protein Cripto) +# Class: (teratocarcinoma-derived growth factor 1) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "protein Cripto") +AnnotationAssertion(rdfs:label "teratocarcinoma-derived growth factor 1") SubClassOf( ) # Class: (ubiquitin domain-containing protein 2) @@ -291768,10 +291818,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "COMM domain-containing protein 5") SubClassOf( ) -# Class: (chondrosarcoma-associated gene 1 protein) +# Class: (putative chondrosarcoma-associated gene 1 protein) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "chondrosarcoma-associated gene 1 protein") +AnnotationAssertion(rdfs:label "putative chondrosarcoma-associated gene 1 protein") SubClassOf( ) # Class: (transcription factor CP2-like protein 1) @@ -291912,10 +291962,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "transmembrane protein 8B") SubClassOf( ) -# Class: (sialate:O-sulfotransferase 2) +# Class: (WSC domain-containing protein 2) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "sialate:O-sulfotransferase 2") +AnnotationAssertion(rdfs:label "WSC domain-containing protein 2") SubClassOf( ) # Class: (translational activator of cytochrome c oxidase 1) @@ -291936,10 +291986,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "palmitoyltransferase ZDHHC4") SubClassOf( ) -# Class: (cotranscriptional regulator ARB2A) +# Class: (cotranscriptional regulator FAM172A) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "cotranscriptional regulator ARB2A") +AnnotationAssertion(rdfs:label "cotranscriptional regulator FAM172A") SubClassOf( ) # Class: (myosin light chain 1/3, skeletal muscle isoform) @@ -292332,10 +292382,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "phenazine biosynthesis-like domain-containing protein") SubClassOf( ) -# Class: (putative adhesion G protein-coupled receptor F2P) +# Class: (adhesion G-protein coupled receptor F2) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "putative adhesion G protein-coupled receptor F2P") +AnnotationAssertion(rdfs:label "adhesion G-protein coupled receptor F2") SubClassOf( ) # Class: (regulation of nuclear pre-mRNA domain-containing protein 1B) @@ -294075,10 +294125,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "WAP four-disulfide core domain protein 10A") SubClassOf( ) -# Class: (putative uncharacterized protein ANP32CP) +# Class: (acidic leucine-rich nuclear phosphoprotein 32 family member C) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "putative uncharacterized protein ANP32CP") +AnnotationAssertion(rdfs:label "acidic leucine-rich nuclear phosphoprotein 32 family member C") SubClassOf( ) # Class: (spermatogenesis-associated protein 24) @@ -294336,24 +294386,6 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "BUB1/BUB1B protein") SubClassOf( ) -# Class: (CD14 molecule cleaved 2 GPI-anchored form (human)) - -AnnotationAssertion(rdfs:comment "Category=organism-modification.") -AnnotationAssertion(rdfs:label "CD14 molecule cleaved 2 GPI-anchored form (human)") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (CD14 molecule cleaved 2 soluble form (human)) - -AnnotationAssertion(rdfs:comment "Category=organism-modification.") -AnnotationAssertion(rdfs:label "CD14 molecule cleaved 2 soluble form (human)") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (GSK3-like glycogen synthase kinase) AnnotationAssertion(rdfs:comment "Category=family.") @@ -294550,42 +294582,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (CD14 molecule cleaved 1 soluble form (human)) - -AnnotationAssertion(rdfs:comment "Category=organism-modification.") -AnnotationAssertion(rdfs:label "CD14 molecule cleaved 1 soluble form (human)") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (CD14 molecule cleaved 2) - -AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "CD14 molecule cleaved 2") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (CD14 molecule cleaved and soluble form) - -AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "CD14 molecule cleaved and soluble form") -EquivalentClasses( ObjectUnionOf( )) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (CD14 molecule cleaved and soluble form (mouse)) - -AnnotationAssertion(rdfs:comment "Category=organism-modification.") -AnnotationAssertion(rdfs:label "CD14 molecule cleaved and soluble form (mouse)") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -EquivalentClasses( ObjectUnionOf( )) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (neurexin-2-beta) AnnotationAssertion(rdfs:comment "Category=seqgroup.") @@ -294607,26 +294603,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (CD14 molecule cleaved and soluble form (human)) - -AnnotationAssertion(rdfs:comment "Category=organism-modification.") -AnnotationAssertion(rdfs:label "CD14 molecule cleaved and soluble form (human)") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -EquivalentClasses( ObjectUnionOf( )) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (CD14 molecule cleaved 2 (mouse)) - -AnnotationAssertion(rdfs:comment "Category=organism-modification.") -AnnotationAssertion(rdfs:label "CD14 molecule cleaved 2 (mouse)") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -EquivalentClasses( ObjectUnionOf( )) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (T-cell surface glycoprotein CD1 (human)) AnnotationAssertion(rdfs:comment "Category=organism-family. Requested by=IEDB. Requested by=ImmPort.") @@ -294751,34 +294727,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (CD14 molecule cleaved 1 soluble form (mouse)) - -AnnotationAssertion(rdfs:comment "Category=organism-modification. Note: The coordinates of the soluble form shown in the example were added based on similarity to the human soluble form corresponding to PR:000002146 [PRO:DAN].") -AnnotationAssertion(rdfs:label "CD14 molecule cleaved 1 soluble form (mouse)") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (CD14 molecule cleaved 2 GPI-anchored form (mouse)) - -AnnotationAssertion(rdfs:comment "Category=organism-modification. Note: The coordinates of the GPI-anchored form shown are based on similarity to the human anchored form PR:000035702 [PRO:DAN].") -AnnotationAssertion(rdfs:label "CD14 molecule cleaved 2 GPI-anchored form (mouse)") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (CD14 molecule cleaved 2 (human)) - -AnnotationAssertion(rdfs:comment "Category=organism-modification.") -AnnotationAssertion(rdfs:label "CD14 molecule cleaved 2 (human)") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -EquivalentClasses( ObjectUnionOf( )) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (Toll-like receptor 3, signal peptide removed form (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-modification. Evidence=(ECO:0000250, based on PR:000037305).") @@ -295880,10 +295828,10 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (methylmalonate-semialdehyde/malonate-semialdehyde dehydrogenase [acylating], mitochondrial, transit peptide removed form (human)) +# Class: (methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial, transit peptide removed form (human)) AnnotationAssertion(rdfs:comment "Category=organism-modification.") -AnnotationAssertion(rdfs:label "methylmalonate-semialdehyde/malonate-semialdehyde dehydrogenase [acylating], mitochondrial, transit peptide removed form (human)") +AnnotationAssertion(rdfs:label "methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial, transit peptide removed form (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -298319,12 +298267,11 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (pro-epidermal growth factor (human)) +# Class: (pro-epidermal growth factor, signal peptide removed form (human)) AnnotationAssertion(rdfs:comment "Category=organism-modification.") -AnnotationAssertion(rdfs:label "pro-epidermal growth factor (human)") +AnnotationAssertion(rdfs:label "pro-epidermal growth factor, signal peptide removed form (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -300649,6 +300596,16 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (Ras GTPase-activating-like protein IQGAP2, initiator methionine removed form (human)) + +AnnotationAssertion(rdfs:comment "Category=organism-modification.") +AnnotationAssertion(rdfs:label "Ras GTPase-activating-like protein IQGAP2, initiator methionine removed form (human)") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (integrin alpha-11, signal peptide removed form (human)) AnnotationAssertion(rdfs:comment "Category=organism-modification.") @@ -301841,19 +301798,19 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein uL1m, transit peptide removed form (human)) +# Class: (39S ribosomal protein L1, mitochondrial, transit peptide removed form (human)) AnnotationAssertion(rdfs:comment "Category=organism-modification.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL1m, transit peptide removed form (human)") +AnnotationAssertion(rdfs:label "39S ribosomal protein L1, mitochondrial, transit peptide removed form (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein uL10m, transit peptide removed form (human)) +# Class: (39S ribosomal protein L10, mitochondrial, transit peptide removed form (human)) AnnotationAssertion(rdfs:comment "Category=organism-modification.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL10m, transit peptide removed form (human)") +AnnotationAssertion(rdfs:label "39S ribosomal protein L10, mitochondrial, transit peptide removed form (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -301868,19 +301825,19 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein uL14m, transit peptide removed form (human)) +# Class: (39S ribosomal protein L14, mitochondrial, transit peptide removed form (human)) AnnotationAssertion(rdfs:comment "Category=organism-modification.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL14m, transit peptide removed form (human)") +AnnotationAssertion(rdfs:label "39S ribosomal protein L14, mitochondrial, transit peptide removed form (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein uL2m, transit peptide removed form (human)) +# Class: (39S ribosomal protein L2, mitochondrial, transit peptide removed form (human)) AnnotationAssertion(rdfs:comment "Category=organism-modification.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL2m, transit peptide removed form (human)") +AnnotationAssertion(rdfs:label "39S ribosomal protein L2, mitochondrial, transit peptide removed form (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -301895,10 +301852,10 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein uL24m, transit peptide removed form (human)) +# Class: (39S ribosomal protein L24, mitochondrial, transit peptide removed form (human)) AnnotationAssertion(rdfs:comment "Category=organism-modification.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL24m, transit peptide removed form (human)") +AnnotationAssertion(rdfs:label "39S ribosomal protein L24, mitochondrial, transit peptide removed form (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -302159,10 +302116,10 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (asparaginyl-tRNA synthetase, transit peptide removed form (human)) +# Class: (probable asparagine--tRNA ligase, mitochondrial, transit peptide removed form (human)) AnnotationAssertion(rdfs:comment "Category=organism-modification.") -AnnotationAssertion(rdfs:label "asparaginyl-tRNA synthetase, transit peptide removed form (human)") +AnnotationAssertion(rdfs:label "probable asparagine--tRNA ligase, mitochondrial, transit peptide removed form (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -302436,10 +302393,10 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (nitric oxide synthase 3, initiator methionine removed form (human)) +# Class: (nitric oxide synthase, endothelial, initiator methionine removed form (human)) AnnotationAssertion(rdfs:comment "Category=organism-modification.") -AnnotationAssertion(rdfs:label "nitric oxide synthase 3, initiator methionine removed form (human)") +AnnotationAssertion(rdfs:label "nitric oxide synthase, endothelial, initiator methionine removed form (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -303548,6 +303505,15 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (peptidyl-tRNA hydrolase 2, mitochondrial, transit peptide removed form (human)) + +AnnotationAssertion(rdfs:comment "Category=organism-modification.") +AnnotationAssertion(rdfs:label "peptidyl-tRNA hydrolase 2, mitochondrial, transit peptide removed form (human)") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (pyrroline-5-carboxylate reductase 1, mitochondrial, initiator methionine removed form (human)) AnnotationAssertion(rdfs:comment "Category=organism-modification.") @@ -303824,10 +303790,10 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein uL18, initiator methionine removed form (human)) +# Class: (60S ribosomal protein L5, initiator methionine removed form (human)) AnnotationAssertion(rdfs:comment "Category=organism-modification.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL18, initiator methionine removed form (human)") +AnnotationAssertion(rdfs:label "60S ribosomal protein L5, initiator methionine removed form (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -306648,6 +306614,14 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "hemoglobin subunit") SubClassOf( ) +# Class: (protein-containing material entity) + +AnnotationAssertion(rdfs:comment "Note: This includes single proteins and derivatives thereof (PR:000000001), protein-containing complexes (GO:0032991), and protein aggregates (PR:000050566).") +AnnotationAssertion(rdfs:label "protein-containing material entity") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (spermatogenesis-associated protein 33) AnnotationAssertion(rdfs:comment "Category=gene.") @@ -306743,10 +306717,10 @@ AnnotationAssertion(rdfs:label "po EquivalentClasses( ObjectUnionOf( )) SubClassOf( ) -# Class: (protein Frey 1) +# Class: (protein Frey) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "protein Frey 1") +AnnotationAssertion(rdfs:label "protein Frey") SubClassOf( ) # Class: (protein FAM229A) @@ -306803,10 +306777,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "single-pass membrane and coiled-coil domain-containing protein 1") SubClassOf( ) -# Class: (HUWE1-associated protein modifying stress responses 1) +# Class: (HUWE1-associated protein modifying stress responses) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "HUWE1-associated protein modifying stress responses 1") +AnnotationAssertion(rdfs:label "HUWE1-associated protein modifying stress responses") SubClassOf( ) # Class: (UPF0561 protein C2orf68) @@ -306815,10 +306789,10 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "UPF0561 protein C2orf68") SubClassOf( ) -# Class: (actin maturation protease) +# Class: (UPF0692 protein C19orf54) AnnotationAssertion(rdfs:comment "Category=gene.") -AnnotationAssertion(rdfs:label "actin maturation protease") +AnnotationAssertion(rdfs:label "UPF0692 protein C19orf54") SubClassOf( ) # Class: (spermatogenesis-associated protein 46) @@ -307339,22 +307313,6 @@ EquivalentClasses( ObjectIntersecti SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectExactCardinality(1 )) -# Class: (pro-epidermal growth factor) - -AnnotationAssertion(rdfs:comment "Category=modification.") -AnnotationAssertion(rdfs:label "pro-epidermal growth factor") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (protein-containing molecular entity) - -AnnotationAssertion(rdfs:comment "Note: This includes single proteins and derivatives thereof (PR:000000001), protein-containing complexes (GO:0032991), and protein aggregates (PR:000050565).") -AnnotationAssertion(rdfs:label "protein-containing molecular entity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (protein GPR15LG (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") @@ -307434,10 +307392,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (immunoglobulin mu Fc receptor (mouse)) +# Class: (Fas apoptotic inhibitory molecule 3 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "immunoglobulin mu Fc receptor (mouse)") +AnnotationAssertion(rdfs:label "Fas apoptotic inhibitory molecule 3 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -308951,24 +308909,15 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (protein Frey 1 (human)) +# Class: (protein Frey (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "protein Frey 1 (human)") +AnnotationAssertion(rdfs:label "protein Frey (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (protein FAM151B (mouse)) - -AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "protein FAM151B (mouse)") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (solute carrier family 35 member G2 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") @@ -309104,10 +309053,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (sialate:O-sulfotransferase 2 (mouse)) +# Class: (WSC domain-containing protein 2 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "sialate:O-sulfotransferase 2 (mouse)") +AnnotationAssertion(rdfs:label "WSC domain-containing protein 2 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -309505,15 +309454,6 @@ AnnotationAssertion(rdfs:label "coile SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (actin maturation protease (mouse)) - -AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "actin maturation protease (mouse)") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (thrombospondin-type laminin G domain and EAR repeat-containing protein (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") @@ -310592,6 +310532,15 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (regenerating islet-derived protein 3-gamma (mouse)) + +AnnotationAssertion(rdfs:comment "Category=organism-gene.") +AnnotationAssertion(rdfs:label "regenerating islet-derived protein 3-gamma (mouse)") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (guanylate cyclase activator 2B (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") @@ -312212,15 +312161,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (pro-neuregulin-3, membrane-bound isoform (mouse)) - -AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "pro-neuregulin-3, membrane-bound isoform (mouse)") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (class E basic helix-loop-helix protein 40 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") @@ -312482,15 +312422,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (X-box-binding protein 1 (mouse)) - -AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "X-box-binding protein 1 (mouse)") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (DNA-directed RNA polymerase III subunit RPC9 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") @@ -313022,10 +312953,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (ciliary microtubule inner protein 4 (human)) +# Class: (testis-expressed protein 33 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "ciliary microtubule inner protein 4 (human)") +AnnotationAssertion(rdfs:label "testis-expressed protein 33 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -313229,10 +313160,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (putative uncharacterized protein ANP32CP (human)) +# Class: (acidic leucine-rich nuclear phosphoprotein 32 family member C (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "putative uncharacterized protein ANP32CP (human)") +AnnotationAssertion(rdfs:label "acidic leucine-rich nuclear phosphoprotein 32 family member C (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -313454,10 +313385,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (5-hydroxymethyl-dUMP N-hydrolase (human)) +# Class: (2'-deoxynucleoside 5'-phosphate N-hydrolase 1 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "5-hydroxymethyl-dUMP N-hydrolase (human)") +AnnotationAssertion(rdfs:label "2'-deoxynucleoside 5'-phosphate N-hydrolase 1 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -314931,10 +314862,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (immunoglobulin mu Fc receptor (human)) +# Class: (Fas apoptotic inhibitory molecule 3 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "immunoglobulin mu Fc receptor (human)") +AnnotationAssertion(rdfs:label "Fas apoptotic inhibitory molecule 3 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -315048,10 +314979,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (small ribosomal subunit protein uS14m (human)) +# Class: (28S ribosomal protein S14, mitochondrial (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "small ribosomal subunit protein uS14m (human)") +AnnotationAssertion(rdfs:label "28S ribosomal protein S14, mitochondrial (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -316137,10 +316068,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein bL33m (human)) +# Class: (39S ribosomal protein L33, mitochondrial (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein bL33m (human)") +AnnotationAssertion(rdfs:label "39S ribosomal protein L33, mitochondrial (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -316551,10 +316482,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (translation initiation factor eIF2 assembly protein (human)) +# Class: (cell division cycle protein 123 homolog (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "translation initiation factor eIF2 assembly protein (human)") +AnnotationAssertion(rdfs:label "cell division cycle protein 123 homolog (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -317676,10 +317607,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (3',5'-cyclic-AMP phosphodiesterase 4A (mouse)) +# Class: (cAMP-specific 3',5'-cyclic phosphodiesterase 4A (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "3',5'-cyclic-AMP phosphodiesterase 4A (mouse)") +AnnotationAssertion(rdfs:label "cAMP-specific 3',5'-cyclic phosphodiesterase 4A (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -319321,10 +319252,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (pre-pro-epidermal growth factor (human)) +# Class: (pro-epidermal growth factor (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "pre-pro-epidermal growth factor (human)") +AnnotationAssertion(rdfs:label "pro-epidermal growth factor (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -319510,10 +319441,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (pancreatic polypeptide prohormone (human)) +# Class: (pancreatic prohormone (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "pancreatic polypeptide prohormone (human)") +AnnotationAssertion(rdfs:label "pancreatic prohormone (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -320859,10 +320790,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein P2 (human)) +# Class: (60S acidic ribosomal protein P2 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein P2 (human)") +AnnotationAssertion(rdfs:label "60S acidic ribosomal protein P2 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -323367,10 +323298,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (pancreatic polypeptide prohormone (mouse)) +# Class: (pancreatic prohormone (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "pancreatic polypeptide prohormone (mouse)") +AnnotationAssertion(rdfs:label "pancreatic prohormone (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -324546,10 +324477,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (protein Cripto (human)) +# Class: (teratocarcinoma-derived growth factor 1 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "protein Cripto (human)") +AnnotationAssertion(rdfs:label "teratocarcinoma-derived growth factor 1 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -325465,10 +325396,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (vascular endothelial growth factor A, long form (human)) +# Class: (vascular endothelial growth factor A (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "vascular endothelial growth factor A, long form (human)") +AnnotationAssertion(rdfs:label "vascular endothelial growth factor A (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -328211,10 +328142,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (nuclear receptor subfamily 4 immunity group A member 1 (human)) +# Class: (nuclear receptor subfamily 4 group A member 1 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "nuclear receptor subfamily 4 immunity group A member 1 (human)") +AnnotationAssertion(rdfs:label "nuclear receptor subfamily 4 group A member 1 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -328949,10 +328880,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (small ribosomal subunit protein eS12 (human)) +# Class: (40S ribosomal protein S12 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS12 (human)") +AnnotationAssertion(rdfs:label "40S ribosomal protein S12 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -329624,10 +329555,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (3',5'-cyclic-AMP phosphodiesterase 4A (human)) +# Class: (cAMP-specific 3',5'-cyclic phosphodiesterase 4A (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "3',5'-cyclic-AMP phosphodiesterase 4A (human)") +AnnotationAssertion(rdfs:label "cAMP-specific 3',5'-cyclic phosphodiesterase 4A (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -330246,19 +330177,19 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (nitric oxide synthase 3 (human)) +# Class: (nitric oxide synthase, endothelial (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "nitric oxide synthase 3 (human)") +AnnotationAssertion(rdfs:label "nitric oxide synthase, endothelial (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (nitric oxide synthase 1 (human)) +# Class: (nitric oxide synthase, brain (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "nitric oxide synthase 1 (human)") +AnnotationAssertion(rdfs:label "nitric oxide synthase, brain (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -330426,10 +330357,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein uL11 (human)) +# Class: (60S ribosomal protein L12 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL11 (human)") +AnnotationAssertion(rdfs:label "60S ribosomal protein L12 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -332145,10 +332076,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein uL11 (mouse)) +# Class: (60S ribosomal protein L12 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL11 (mouse)") +AnnotationAssertion(rdfs:label "60S ribosomal protein L12 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -332532,10 +332463,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (small ribosomal subunit protein eS19 (human)) +# Class: (40S ribosomal protein S19 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS19 (human)") +AnnotationAssertion(rdfs:label "40S ribosomal protein S19 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -334116,19 +334047,19 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein uL18 (human)) +# Class: (60S ribosomal protein L5 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL18 (human)") +AnnotationAssertion(rdfs:label "60S ribosomal protein L5 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (small ribosomal subunit protein eS10 (human)) +# Class: (40S ribosomal protein S10 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS10 (human)") +AnnotationAssertion(rdfs:label "40S ribosomal protein S10 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -334368,10 +334299,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (retinaldehyde dehydrogenase 3 (human)) +# Class: (aldehyde dehydrogenase family 1 member A3 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "retinaldehyde dehydrogenase 3 (human)") +AnnotationAssertion(rdfs:label "aldehyde dehydrogenase family 1 member A3 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -334431,10 +334362,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein uL18 (mouse)) +# Class: (60S ribosomal protein L5 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL18 (mouse)") +AnnotationAssertion(rdfs:label "60S ribosomal protein L5 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -335961,10 +335892,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein eL14 (human)) +# Class: (60S ribosomal protein L14 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein eL14 (human)") +AnnotationAssertion(rdfs:label "60S ribosomal protein L14 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -336834,10 +336765,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein bL12m (human)) +# Class: (39S ribosomal protein L12, mitochondrial (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein bL12m (human)") +AnnotationAssertion(rdfs:label "39S ribosomal protein L12, mitochondrial (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -338472,10 +338403,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (exosome complex component 10 (mouse)) +# Class: (exosome component 10 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "exosome complex component 10 (mouse)") +AnnotationAssertion(rdfs:label "exosome component 10 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -339231,19 +339162,19 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (small ribosomal subunit protein uS10 (human)) +# Class: (40S ribosomal protein S20 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "small ribosomal subunit protein uS10 (human)") +AnnotationAssertion(rdfs:label "40S ribosomal protein S20 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (small ribosomal subunit protein uS10 (mouse)) +# Class: (40S ribosomal protein S20 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "small ribosomal subunit protein uS10 (mouse)") +AnnotationAssertion(rdfs:label "40S ribosomal protein S20 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -339573,10 +339504,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (small ribosomal subunit protein eS1 (human)) +# Class: (40S ribosomal protein S3a (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS1 (human)") +AnnotationAssertion(rdfs:label "40S ribosomal protein S3a (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -340104,19 +340035,19 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (small ribosomal subunit protein uS11 (human)) +# Class: (40S ribosomal protein S14 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "small ribosomal subunit protein uS11 (human)") +AnnotationAssertion(rdfs:label "40S ribosomal protein S14 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (small ribosomal subunit protein uS11 (mouse)) +# Class: (40S ribosomal protein S14 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "small ribosomal subunit protein uS11 (mouse)") +AnnotationAssertion(rdfs:label "40S ribosomal protein S14 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -340311,19 +340242,19 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (small ribosomal subunit protein eS4, X isoform (human)) +# Class: (40S ribosomal protein S4, X isoform (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS4, X isoform (human)") +AnnotationAssertion(rdfs:label "40S ribosomal protein S4, X isoform (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (small ribosomal subunit protein eS4 (mouse)) +# Class: (40S ribosomal protein S4, X isoform (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS4 (mouse)") +AnnotationAssertion(rdfs:label "40S ribosomal protein S4, X isoform (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -340482,19 +340413,19 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (small ribosomal subunit protein eS25 (human)) +# Class: (40S ribosomal protein S25 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS25 (human)") +AnnotationAssertion(rdfs:label "40S ribosomal protein S25 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (small ribosomal subunit protein eS25 (mouse)) +# Class: (40S ribosomal protein S25 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS25 (mouse)") +AnnotationAssertion(rdfs:label "40S ribosomal protein S25 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -340509,28 +340440,28 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein eL30 (human)) +# Class: (60S ribosomal protein L30 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein eL30 (human)") +AnnotationAssertion(rdfs:label "60S ribosomal protein L30 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein eL30 (mouse)) +# Class: (60S ribosomal protein L30 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein eL30 (mouse)") +AnnotationAssertion(rdfs:label "60S ribosomal protein L30 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein uL5 (human)) +# Class: (60S ribosomal protein L11 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL5 (human)") +AnnotationAssertion(rdfs:label "60S ribosomal protein L11 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -340824,10 +340755,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein eL38 (human)) +# Class: (60S ribosomal protein L38 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein eL38 (human)") +AnnotationAssertion(rdfs:label "60S ribosomal protein L38 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -340878,10 +340809,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (small ribosomal subunit protein RACK1 (human)) +# Class: (receptor of activated protein C kinase 1 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "small ribosomal subunit protein RACK1 (human)") +AnnotationAssertion(rdfs:label "receptor of activated protein C kinase 1 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -340932,19 +340863,19 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (small ribosomal subunit protein eS12 (mouse)) +# Class: (40S ribosomal protein S12 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS12 (mouse)") +AnnotationAssertion(rdfs:label "40S ribosomal protein S12 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (small ribosomal subunit protein eS10 (mouse)) +# Class: (40S ribosomal protein S10 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS10 (mouse)") +AnnotationAssertion(rdfs:label "40S ribosomal protein S10 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -340977,10 +340908,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (small ribosomal subunit protein RACK1 (mouse)) +# Class: (receptor of activated protein C kinase 1 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "small ribosomal subunit protein RACK1 (mouse)") +AnnotationAssertion(rdfs:label "receptor of activated protein C kinase 1 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -341265,10 +341196,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (nitric oxide synthase 3 (mouse)) +# Class: (nitric oxide synthase, endothelial (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "nitric oxide synthase 3 (mouse)") +AnnotationAssertion(rdfs:label "nitric oxide synthase, endothelial (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -342282,10 +342213,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (small ribosomal subunit protein eS1 (mouse)) +# Class: (40S ribosomal protein S3a (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS1 (mouse)") +AnnotationAssertion(rdfs:label "40S ribosomal protein S3a (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -343074,10 +343005,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein P2 (mouse)) +# Class: (60S acidic ribosomal protein P2 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein P2 (mouse)") +AnnotationAssertion(rdfs:label "60S acidic ribosomal protein P2 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -343308,10 +343239,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (vascular endothelial growth factor A, long form (mouse)) +# Class: (vascular endothelial growth factor A (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "vascular endothelial growth factor A, long form (mouse)") +AnnotationAssertion(rdfs:label "vascular endothelial growth factor A (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -343612,10 +343543,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (exosome complex component 10 (human)) +# Class: (exosome component 10 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "exosome complex component 10 (human)") +AnnotationAssertion(rdfs:label "exosome component 10 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -343765,10 +343696,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (methylmalonate-semialdehyde/malonate-semialdehyde dehydrogenase [acylating], mitochondrial (human)) +# Class: (methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "methylmalonate-semialdehyde/malonate-semialdehyde dehydrogenase [acylating], mitochondrial (human)") +AnnotationAssertion(rdfs:label "methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -344944,10 +344875,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (amino acid transporter heavy chain SLC3A1 (human)) +# Class: (neutral and basic amino acid transport protein rBAT (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "amino acid transporter heavy chain SLC3A1 (human)") +AnnotationAssertion(rdfs:label "neutral and basic amino acid transport protein rBAT (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -345124,10 +345055,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (3',5'-cyclic-AMP phosphodiesterase 4C (human)) +# Class: (cAMP-specific 3',5'-cyclic phosphodiesterase 4C (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "3',5'-cyclic-AMP phosphodiesterase 4C (human)") +AnnotationAssertion(rdfs:label "cAMP-specific 3',5'-cyclic phosphodiesterase 4C (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -346159,10 +346090,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein bL28m (human)) +# Class: (39S ribosomal protein L28, mitochondrial (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein bL28m (human)") +AnnotationAssertion(rdfs:label "39S ribosomal protein L28, mitochondrial (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -347374,10 +347305,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein mL62 (human)) +# Class: (peptidyl-tRNA hydrolase ICT1, mitochondrial (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein mL62 (human)") +AnnotationAssertion(rdfs:label "peptidyl-tRNA hydrolase ICT1, mitochondrial (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -347428,10 +347359,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (translation initiation factor eIF2B subunit alpha (human)) +# Class: (translation initiation factor eIF-2B subunit alpha (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "translation initiation factor eIF2B subunit alpha (human)") +AnnotationAssertion(rdfs:label "translation initiation factor eIF-2B subunit alpha (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -348175,19 +348106,19 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (HUWE1-associated protein modifying stress responses 1 (human)) +# Class: (HUWE1-associated protein modifying stress responses (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "HUWE1-associated protein modifying stress responses 1 (human)") +AnnotationAssertion(rdfs:label "HUWE1-associated protein modifying stress responses (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (hepatic and glial cell adhesion molecule (human)) +# Class: (hepatocyte cell adhesion molecule (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "hepatic and glial cell adhesion molecule (human)") +AnnotationAssertion(rdfs:label "hepatocyte cell adhesion molecule (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -348452,10 +348383,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (BOS complex subunit NOMO1 (human)) +# Class: (nodal modulator 1 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "BOS complex subunit NOMO1 (human)") +AnnotationAssertion(rdfs:label "nodal modulator 1 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -348731,10 +348662,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (superkiller complex protein 2 (human)) +# Class: (SKI2 subunit of superkiller complex protein (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "superkiller complex protein 2 (human)") +AnnotationAssertion(rdfs:label "SKI2 subunit of superkiller complex protein (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -350163,10 +350094,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (sialate:O-sulfotransferase 2 (human)) +# Class: (WSC domain-containing protein 2 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "sialate:O-sulfotransferase 2 (human)") +AnnotationAssertion(rdfs:label "WSC domain-containing protein 2 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -350577,10 +350508,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein uL10m (mouse)) +# Class: (39S ribosomal protein L10, mitochondrial (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL10m (mouse)") +AnnotationAssertion(rdfs:label "39S ribosomal protein L10, mitochondrial (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -350757,10 +350688,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (cotranscriptional regulator ARB2A (mouse)) +# Class: (cotranscriptional regulator FAM172A (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "cotranscriptional regulator ARB2A (mouse)") +AnnotationAssertion(rdfs:label "cotranscriptional regulator FAM172A (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -351171,10 +351102,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (3',5'-cyclic-AMP phosphodiesterase 4C (mouse)) +# Class: (cAMP-specific 3',5'-cyclic phosphodiesterase 4C (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "3',5'-cyclic-AMP phosphodiesterase 4C (mouse)") +AnnotationAssertion(rdfs:label "cAMP-specific 3',5'-cyclic phosphodiesterase 4C (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -351450,10 +351381,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (ATPase family gene 2 protein homolog A (mouse)) +# Class: (ribosome biogenesis protein SPATA5 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "ATPase family gene 2 protein homolog A (mouse)") +AnnotationAssertion(rdfs:label "ribosome biogenesis protein SPATA5 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -351738,15 +351669,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (sperm-associated antigen 11B (mouse)) - -AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "sperm-associated antigen 11B (mouse)") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (calpain-13 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") @@ -352834,10 +352756,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (actin maturation protease (human)) +# Class: (UPF0692 protein C19orf54 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "actin maturation protease (human)") +AnnotationAssertion(rdfs:label "UPF0692 protein C19orf54 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -353284,10 +353206,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (BOS complex subunit NOMO2 (human)) +# Class: (nodal modulator 2 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "BOS complex subunit NOMO2 (human)") +AnnotationAssertion(rdfs:label "nodal modulator 2 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -353914,10 +353836,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein uL2m (human)) +# Class: (39S ribosomal protein L2, mitochondrial (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL2m (human)") +AnnotationAssertion(rdfs:label "39S ribosomal protein L2, mitochondrial (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -353968,10 +353890,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (metabotropic glycine receptor (human)) +# Class: (probable G-protein coupled receptor 158 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "metabotropic glycine receptor (human)") +AnnotationAssertion(rdfs:label "probable G-protein coupled receptor 158 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -353986,10 +353908,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (EEIG family member 2 (human)) +# Class: (protein FAM102B (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "EEIG family member 2 (human)") +AnnotationAssertion(rdfs:label "protein FAM102B (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -356956,10 +356878,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (hepatic and glial cell adhesion molecule (mouse)) +# Class: (hepatocyte cell adhesion molecule (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "hepatic and glial cell adhesion molecule (mouse)") +AnnotationAssertion(rdfs:label "hepatocyte cell adhesion molecule (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -358709,15 +358631,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (superkiller complex protein 2 (mouse)) - -AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "superkiller complex protein 2 (mouse)") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (zinc finger CCHC domain-containing protein 8 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") @@ -358781,10 +358694,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein uL14m (human)) +# Class: (39S ribosomal protein L14, mitochondrial (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL14m (human)") +AnnotationAssertion(rdfs:label "39S ribosomal protein L14, mitochondrial (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -359321,10 +359234,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (chondrosarcoma-associated gene 1 protein (human)) +# Class: (putative chondrosarcoma-associated gene 1 protein (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "chondrosarcoma-associated gene 1 protein (human)") +AnnotationAssertion(rdfs:label "putative chondrosarcoma-associated gene 1 protein (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -360075,6 +359988,15 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (regenerating islet-derived protein 3-gamma (human)) + +AnnotationAssertion(rdfs:comment "Category=organism-gene.") +AnnotationAssertion(rdfs:label "regenerating islet-derived protein 3-gamma (human)") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (sperm equatorial segment protein 1 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") @@ -362245,10 +362167,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein bL21m (human)) +# Class: (39S ribosomal protein L21, mitochondrial (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein bL21m (human)") +AnnotationAssertion(rdfs:label "39S ribosomal protein L21, mitochondrial (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -362650,10 +362572,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein mL55 (human)) +# Class: (39S ribosomal protein L55, mitochondrial (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein mL55 (human)") +AnnotationAssertion(rdfs:label "39S ribosomal protein L55, mitochondrial (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -362686,10 +362608,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein uL10m (human)) +# Class: (39S ribosomal protein L10, mitochondrial (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL10m (human)") +AnnotationAssertion(rdfs:label "39S ribosomal protein L10, mitochondrial (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -363154,10 +363076,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (5-hydroxymethyl-dUMP N-hydrolase (mouse)) +# Class: (2'-deoxynucleoside 5'-phosphate N-hydrolase 1 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "5-hydroxymethyl-dUMP N-hydrolase (mouse)") +AnnotationAssertion(rdfs:label "2'-deoxynucleoside 5'-phosphate N-hydrolase 1 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -364072,10 +363994,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein mL52 (human)) +# Class: (39S ribosomal protein L52, mitochondrial (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein mL52 (human)") +AnnotationAssertion(rdfs:label "39S ribosomal protein L52, mitochondrial (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -365152,10 +365074,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (asparaginyl-tRNA synthetase (mouse)) +# Class: (probable asparagine--tRNA ligase, mitochondrial (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "asparaginyl-tRNA synthetase (mouse)") +AnnotationAssertion(rdfs:label "probable asparagine--tRNA ligase, mitochondrial (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -366448,10 +366370,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (EEIG family member 2 (mouse)) +# Class: (protein FAM102B (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "EEIG family member 2 (mouse)") +AnnotationAssertion(rdfs:label "protein FAM102B (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -367960,10 +367882,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (metabotropic glycine receptor (mouse)) +# Class: (probable G-protein coupled receptor 158 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "metabotropic glycine receptor (mouse)") +AnnotationAssertion(rdfs:label "probable G-protein coupled receptor 158 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -369220,10 +369142,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (translation initiation factor eIF2 assembly protein (mouse)) +# Class: (cell division cycle protein 123 homolog (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "translation initiation factor eIF2 assembly protein (mouse)") +AnnotationAssertion(rdfs:label "cell division cycle protein 123 homolog (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -370244,10 +370166,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (putative adhesion G protein-coupled receptor F2P (human)) +# Class: (adhesion G-protein coupled receptor F2 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "putative adhesion G protein-coupled receptor F2P (human)") +AnnotationAssertion(rdfs:label "adhesion G-protein coupled receptor F2 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -371027,10 +370949,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein mL38 (mouse)) +# Class: (39S ribosomal protein L38, mitochondrial (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein mL38 (mouse)") +AnnotationAssertion(rdfs:label "39S ribosomal protein L38, mitochondrial (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -372609,10 +372531,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (ATPase family gene 2 protein homolog A (human)) +# Class: (ribosome biogenesis protein SPATA5 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "ATPase family gene 2 protein homolog A (human)") +AnnotationAssertion(rdfs:label "ribosome biogenesis protein SPATA5 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -373498,10 +373420,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein mL62 (mouse)) +# Class: (peptidyl-tRNA hydrolase ICT1, mitochondrial (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein mL62 (mouse)") +AnnotationAssertion(rdfs:label "peptidyl-tRNA hydrolase ICT1, mitochondrial (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -373768,10 +373690,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (WW domain binding protein VOPP1 (mouse)) +# Class: (vesicular, overexpressed in cancer, prosurvival protein 1 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "WW domain binding protein VOPP1 (mouse)") +AnnotationAssertion(rdfs:label "vesicular, overexpressed in cancer, prosurvival protein 1 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -374695,10 +374617,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein mL64 (human)) +# Class: (growth arrest and DNA damage-inducible proteins-interacting protein 1 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein mL64 (human)") +AnnotationAssertion(rdfs:label "growth arrest and DNA damage-inducible proteins-interacting protein 1 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -375762,10 +375684,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (BOS complex subunit NCLN (mouse)) +# Class: (nicalin (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "BOS complex subunit NCLN (mouse)") +AnnotationAssertion(rdfs:label "nicalin (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -375978,15 +375900,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (ETS-related transcription factor Elf-5 (mouse)) - -AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "ETS-related transcription factor Elf-5 (mouse)") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (ADP-dependent glucokinase (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") @@ -376669,10 +376582,10 @@ AnnotationAssertion(rdfs:label "cance SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (cotranscriptional regulator ARB2A (human)) +# Class: (cotranscriptional regulator FAM172A (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "cotranscriptional regulator ARB2A (human)") +AnnotationAssertion(rdfs:label "cotranscriptional regulator FAM172A (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -378123,10 +378036,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (amino acid transporter heavy chain SLC3A1 (mouse)) +# Class: (neutral and basic amino acid transport protein rBAT (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "amino acid transporter heavy chain SLC3A1 (mouse)") +AnnotationAssertion(rdfs:label "neutral and basic amino acid transport protein rBAT (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -380427,10 +380340,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (BOS complex subunit NCLN (human)) +# Class: (nicalin (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "BOS complex subunit NCLN (human)") +AnnotationAssertion(rdfs:label "nicalin (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -380526,10 +380439,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein uL24m (human)) +# Class: (39S ribosomal protein L24, mitochondrial (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL24m (human)") +AnnotationAssertion(rdfs:label "39S ribosomal protein L24, mitochondrial (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -380688,10 +380601,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (WW domain binding protein VOPP1 (human)) +# Class: (vesicular, overexpressed in cancer, prosurvival protein 1 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "WW domain binding protein VOPP1 (human)") +AnnotationAssertion(rdfs:label "vesicular, overexpressed in cancer, prosurvival protein 1 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -381210,10 +381123,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein mL38 (human)) +# Class: (39S ribosomal protein L38, mitochondrial (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein mL38 (human)") +AnnotationAssertion(rdfs:label "39S ribosomal protein L38, mitochondrial (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -381847,10 +381760,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (asparaginyl-tRNA synthetase (human)) +# Class: (probable asparagine--tRNA ligase, mitochondrial (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "asparaginyl-tRNA synthetase (human)") +AnnotationAssertion(rdfs:label "probable asparagine--tRNA ligase, mitochondrial (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -384429,10 +384342,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (translation initiation factor eIF2B subunit alpha (mouse)) +# Class: (translation initiation factor eIF-2B subunit alpha (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "translation initiation factor eIF2B subunit alpha (mouse)") +AnnotationAssertion(rdfs:label "translation initiation factor eIF-2B subunit alpha (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -384843,19 +384756,19 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein bL34m (mouse)) +# Class: (39S ribosomal protein L34, mitochondrial (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein bL34m (mouse)") +AnnotationAssertion(rdfs:label "39S ribosomal protein L34, mitochondrial (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein uL1m (mouse)) +# Class: (39S ribosomal protein L1, mitochondrial (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL1m (mouse)") +AnnotationAssertion(rdfs:label "39S ribosomal protein L1, mitochondrial (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -385158,10 +385071,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein bL34m (human)) +# Class: (39S ribosomal protein L34, mitochondrial (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein bL34m (human)") +AnnotationAssertion(rdfs:label "39S ribosomal protein L34, mitochondrial (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -386607,19 +386520,19 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein bL32m (human)) +# Class: (39S ribosomal protein L32, mitochondrial (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein bL32m (human)") +AnnotationAssertion(rdfs:label "39S ribosomal protein L32, mitochondrial (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein uL1m (human)) +# Class: (39S ribosomal protein L1, mitochondrial (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL1m (human)") +AnnotationAssertion(rdfs:label "39S ribosomal protein L1, mitochondrial (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -387156,10 +387069,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (small ribosomal subunit protein bS16m (mouse)) +# Class: (28S ribosomal protein S16, mitochondrial (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "small ribosomal subunit protein bS16m (mouse)") +AnnotationAssertion(rdfs:label "28S ribosomal protein S16, mitochondrial (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -387210,10 +387123,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein uL24m (mouse)) +# Class: (39S ribosomal protein L24, mitochondrial (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL24m (mouse)") +AnnotationAssertion(rdfs:label "39S ribosomal protein L24, mitochondrial (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -387615,10 +387528,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein bL33m (mouse)) +# Class: (39S ribosomal protein L33, mitochondrial (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein bL33m (mouse)") +AnnotationAssertion(rdfs:label "39S ribosomal protein L33, mitochondrial (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -387921,19 +387834,19 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein eL14 (mouse)) +# Class: (60S ribosomal protein L14 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein eL14 (mouse)") +AnnotationAssertion(rdfs:label "60S ribosomal protein L14 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein mL64 (mouse)) +# Class: (growth arrest and DNA damage-inducible proteins-interacting protein 1 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein mL64 (mouse)") +AnnotationAssertion(rdfs:label "growth arrest and DNA damage-inducible proteins-interacting protein 1 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -387984,10 +387897,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (small ribosomal subunit protein uS14m (mouse)) +# Class: (28S ribosomal protein S14, mitochondrial (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "small ribosomal subunit protein uS14m (mouse)") +AnnotationAssertion(rdfs:label "28S ribosomal protein S14, mitochondrial (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -388551,10 +388464,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein uL5 (mouse)) +# Class: (60S ribosomal protein L11 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL5 (mouse)") +AnnotationAssertion(rdfs:label "60S ribosomal protein L11 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -388803,10 +388716,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein mL55 (mouse)) +# Class: (39S ribosomal protein L55, mitochondrial (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein mL55 (mouse)") +AnnotationAssertion(rdfs:label "39S ribosomal protein L55, mitochondrial (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -389019,10 +388932,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (small ribosomal subunit protein eS19 (mouse)) +# Class: (40S ribosomal protein S19 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "small ribosomal subunit protein eS19 (mouse)") +AnnotationAssertion(rdfs:label "40S ribosomal protein S19 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -389280,10 +389193,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein mL52 (mouse)) +# Class: (39S ribosomal protein L52, mitochondrial (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein mL52 (mouse)") +AnnotationAssertion(rdfs:label "39S ribosomal protein L52, mitochondrial (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -389370,10 +389283,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein bL28m (mouse)) +# Class: (39S ribosomal protein L28, mitochondrial (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein bL28m (mouse)") +AnnotationAssertion(rdfs:label "39S ribosomal protein L28, mitochondrial (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -389478,10 +389391,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein uL14m (mouse)) +# Class: (39S ribosomal protein L14, mitochondrial (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL14m (mouse)") +AnnotationAssertion(rdfs:label "39S ribosomal protein L14, mitochondrial (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -389541,10 +389454,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein bL21m (mouse)) +# Class: (39S ribosomal protein L21, mitochondrial (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein bL21m (mouse)") +AnnotationAssertion(rdfs:label "39S ribosomal protein L21, mitochondrial (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -390351,10 +390264,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein uL2m (mouse)) +# Class: (39S ribosomal protein L2, mitochondrial (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein uL2m (mouse)") +AnnotationAssertion(rdfs:label "39S ribosomal protein L2, mitochondrial (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -390945,10 +390858,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (ciliary microtubule inner protein 4 (mouse)) +# Class: (testis-expressed protein 33 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "ciliary microtubule inner protein 4 (mouse)") +AnnotationAssertion(rdfs:label "testis-expressed protein 33 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -391296,10 +391209,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein bL12m (mouse)) +# Class: (39S ribosomal protein L12, mitochondrial (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein bL12m (mouse)") +AnnotationAssertion(rdfs:label "39S ribosomal protein L12, mitochondrial (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -391530,15 +391443,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (ubiquitin-like modifier-activating enzyme 7 (mouse)) - -AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "ubiquitin-like modifier-activating enzyme 7 (mouse)") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (short/branched chain specific acyl-CoA dehydrogenase, mitochondrial (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") @@ -391818,10 +391722,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein bL32m (mouse)) +# Class: (39S ribosomal protein L32, mitochondrial (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein bL32m (mouse)") +AnnotationAssertion(rdfs:label "39S ribosomal protein L32, mitochondrial (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -392196,10 +392100,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (methylmalonate-semialdehyde/malonate-semialdehyde dehydrogenase [acylating], mitochondrial (mouse)) +# Class: (methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "methylmalonate-semialdehyde/malonate-semialdehyde dehydrogenase [acylating], mitochondrial (mouse)") +AnnotationAssertion(rdfs:label "methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -392295,10 +392199,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein mL46 (mouse)) +# Class: (39S ribosomal protein L46, mitochondrial (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein mL46 (mouse)") +AnnotationAssertion(rdfs:label "39S ribosomal protein L46, mitochondrial (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -393690,10 +393594,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein mL46 (human)) +# Class: (39S ribosomal protein L46, mitochondrial (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein mL46 (human)") +AnnotationAssertion(rdfs:label "39S ribosomal protein L46, mitochondrial (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -395365,10 +395269,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (U5 small nuclear ribonucleoprotein TSSC4 (mouse)) +# Class: (protein TSSC4 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "U5 small nuclear ribonucleoprotein TSSC4 (mouse)") +AnnotationAssertion(rdfs:label "protein TSSC4 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -395563,10 +395467,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (retinaldehyde dehydrogenase 3 (mouse)) +# Class: (aldehyde dehydrogenase family 1 member A3 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "retinaldehyde dehydrogenase 3 (mouse)") +AnnotationAssertion(rdfs:label "aldehyde dehydrogenase family 1 member A3 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -395887,10 +395791,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (large ribosomal subunit protein eL38 (mouse)) +# Class: (60S ribosomal protein L38 (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "large ribosomal subunit protein eL38 (mouse)") +AnnotationAssertion(rdfs:label "60S ribosomal protein L38 (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -401912,10 +401816,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (inactive cell surface hyaluronidase CEMIP2 (human)) +# Class: (cell surface hyaluronidase (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "inactive cell surface hyaluronidase CEMIP2 (human)") +AnnotationAssertion(rdfs:label "cell surface hyaluronidase (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -403406,10 +403310,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (ribosomal protein uL24-like (human)) +# Class: (60S ribosomal protein L26-like 1 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "ribosomal protein uL24-like (human)") +AnnotationAssertion(rdfs:label "60S ribosomal protein L26-like 1 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -404144,15 +404048,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (C-C motif chemokine 17 (mouse)) - -AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "C-C motif chemokine 17 (mouse)") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (protein FAM50A (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") @@ -404558,10 +404453,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (putative uncharacterized protein ANKRD13C-DT (human)) +# Class: (HERV-H LTR-associating protein 3 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "putative uncharacterized protein ANKRD13C-DT (human)") +AnnotationAssertion(rdfs:label "HERV-H LTR-associating protein 3 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -405260,10 +405155,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (small ribosomal subunit protein bS16m (human)) +# Class: (28S ribosomal protein S16, mitochondrial (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "small ribosomal subunit protein bS16m (human)") +AnnotationAssertion(rdfs:label "28S ribosomal protein S16, mitochondrial (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -405845,10 +405740,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (U5 small nuclear ribonucleoprotein TSSC4 (human)) +# Class: (protein TSSC4 (human)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "U5 small nuclear ribonucleoprotein TSSC4 (human)") +AnnotationAssertion(rdfs:label "protein TSSC4 (human)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -406520,10 +406415,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (nitric oxide synthase 1 (mouse)) +# Class: (nitric oxide synthase, brain (mouse)) AnnotationAssertion(rdfs:comment "Category=organism-gene.") -AnnotationAssertion(rdfs:label "nitric oxide synthase 1 (mouse)") +AnnotationAssertion(rdfs:label "nitric oxide synthase, brain (mouse)") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) diff --git a/src/patterns/data/default/disease_onset.tsv b/src/patterns/data/default/disease_onset.tsv index c64ae7ff..14932ed3 100644 --- a/src/patterns/data/default/disease_onset.tsv +++ b/src/patterns/data/default/disease_onset.tsv @@ -43,3 +43,4 @@ OBA:2050099 MONDO:0005351 anorexia nervosa OBA:2050327 MONDO:0005575 colorectal cancer OBA:2050353 MONDO:0005184 pancreatic ductal adenocarcinoma OBA:2050355 MONDO:0004235 diverticulitis +OBA:2051964 MONDO:0015494 isolated dystonia diff --git a/src/patterns/definitions.owl b/src/patterns/definitions.owl index 4e0e9a1a..b967e0b3 100644 --- a/src/patterns/definitions.owl +++ b/src/patterns/definitions.owl @@ -7,8 +7,8 @@ Prefix(rdfs:=) Ontology( - -Annotation(owl:versionInfo "2024-10-17") + +Annotation(owl:versionInfo "2024-10-31") Declaration(Class()) Declaration(Class()) @@ -1574,6 +1574,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -14195,6 +14196,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -66002,9 +66004,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of aldehyde dehydrogenase family 1 member A3 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a retinaldehyde dehydrogenase 3 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a aldehyde dehydrogenase family 1 member A3 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum retinaldehyde dehydrogenase 3 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum aldehyde dehydrogenase family 1 member A3 amount") AnnotationAssertion(rdfs:label "level of aldehyde dehydrogenase family 1 member A3 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -66042,9 +66044,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a methylmalonate-semialdehyde/malonate-semialdehyde dehydrogenase [acylating], mitochondrial when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum methylmalonate-semialdehyde/malonate-semialdehyde dehydrogenase [acylating], mitochondrial amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial amount") AnnotationAssertion(rdfs:label "level of methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -72778,9 +72780,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of vesicular, overexpressed in cancer, prosurvival protein 1 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a WW domain binding protein VOPP1 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a vesicular, overexpressed in cancer, prosurvival protein 1 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum WW domain binding protein VOPP1 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum vesicular, overexpressed in cancer, prosurvival protein 1 amount") AnnotationAssertion(rdfs:label "level of vesicular, overexpressed in cancer, prosurvival protein 1 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -73034,9 +73036,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of translation initiation factor eIF-2B subunit alpha in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a translation initiation factor eIF2B subunit alpha when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a translation initiation factor eIF-2B subunit alpha when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum translation initiation factor eIF2B subunit alpha amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum translation initiation factor eIF-2B subunit alpha amount") AnnotationAssertion(rdfs:label "level of translation initiation factor eIF-2B subunit alpha in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -73882,9 +73884,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of Fas apoptotic inhibitory molecule 3 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a immunoglobulin mu Fc receptor when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a Fas apoptotic inhibitory molecule 3 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum immunoglobulin mu Fc receptor amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum Fas apoptotic inhibitory molecule 3 amount") AnnotationAssertion(rdfs:label "level of Fas apoptotic inhibitory molecule 3 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -74730,9 +74732,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of growth arrest and DNA damage-inducible proteins-interacting protein 1 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a large ribosomal subunit protein mL64 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a growth arrest and DNA damage-inducible proteins-interacting protein 1 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum large ribosomal subunit protein mL64 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum growth arrest and DNA damage-inducible proteins-interacting protein 1 amount") AnnotationAssertion(rdfs:label "level of growth arrest and DNA damage-inducible proteins-interacting protein 1 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -75514,9 +75516,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of receptor of activated protein C kinase 1 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a small ribosomal subunit protein RACK1 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a receptor of activated protein C kinase 1 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum small ribosomal subunit protein RACK1 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum receptor of activated protein C kinase 1 amount") AnnotationAssertion(rdfs:label "level of receptor of activated protein C kinase 1 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -76365,9 +76367,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of hepatocyte cell adhesion molecule in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a hepatic and glial cell adhesion molecule when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a hepatocyte cell adhesion molecule when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum hepatic and glial cell adhesion molecule amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum hepatocyte cell adhesion molecule amount") AnnotationAssertion(rdfs:label "level of hepatocyte cell adhesion molecule in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -76501,9 +76503,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of HERV-H LTR-associating protein 3 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a putative uncharacterized protein ANKRD13C-DT when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a HERV-H LTR-associating protein 3 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum putative uncharacterized protein ANKRD13C-DT amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum HERV-H LTR-associating protein 3 amount") AnnotationAssertion(rdfs:label "level of HERV-H LTR-associating protein 3 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -80877,113 +80879,113 @@ EquivalentClasses( ObjectIntersectio # Class: (level of 39S ribosomal protein L1, mitochondrial in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a large ribosomal subunit protein uL1m when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 39S ribosomal protein L1, mitochondrial when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum large ribosomal subunit protein uL1m amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 39S ribosomal protein L1, mitochondrial amount") AnnotationAssertion(rdfs:label "level of 39S ribosomal protein L1, mitochondrial in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 39S ribosomal protein L10, mitochondrial in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a large ribosomal subunit protein uL10m when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 39S ribosomal protein L10, mitochondrial when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum large ribosomal subunit protein uL10m amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 39S ribosomal protein L10, mitochondrial amount") AnnotationAssertion(rdfs:label "level of 39S ribosomal protein L10, mitochondrial in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 39S ribosomal protein L12, mitochondrial in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a large ribosomal subunit protein bL12m when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 39S ribosomal protein L12, mitochondrial when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum large ribosomal subunit protein bL12m amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 39S ribosomal protein L12, mitochondrial amount") AnnotationAssertion(rdfs:label "level of 39S ribosomal protein L12, mitochondrial in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 39S ribosomal protein L14, mitochondrial in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a large ribosomal subunit protein uL14m when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 39S ribosomal protein L14, mitochondrial when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum large ribosomal subunit protein uL14m amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 39S ribosomal protein L14, mitochondrial amount") AnnotationAssertion(rdfs:label "level of 39S ribosomal protein L14, mitochondrial in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 39S ribosomal protein L2, mitochondrial in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a large ribosomal subunit protein uL2m when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 39S ribosomal protein L2, mitochondrial when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum large ribosomal subunit protein uL2m amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 39S ribosomal protein L2, mitochondrial amount") AnnotationAssertion(rdfs:label "level of 39S ribosomal protein L2, mitochondrial in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 39S ribosomal protein L21, mitochondrial in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a large ribosomal subunit protein bL21m when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 39S ribosomal protein L21, mitochondrial when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum large ribosomal subunit protein bL21m amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 39S ribosomal protein L21, mitochondrial amount") AnnotationAssertion(rdfs:label "level of 39S ribosomal protein L21, mitochondrial in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 39S ribosomal protein L28, mitochondrial in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a large ribosomal subunit protein bL28m when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 39S ribosomal protein L28, mitochondrial when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum large ribosomal subunit protein bL28m amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 39S ribosomal protein L28, mitochondrial amount") AnnotationAssertion(rdfs:label "level of 39S ribosomal protein L28, mitochondrial in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 39S ribosomal protein L32, mitochondrial in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a large ribosomal subunit protein bL32m when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 39S ribosomal protein L32, mitochondrial when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum large ribosomal subunit protein bL32m amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 39S ribosomal protein L32, mitochondrial amount") AnnotationAssertion(rdfs:label "level of 39S ribosomal protein L32, mitochondrial in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 39S ribosomal protein L33, mitochondrial in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a large ribosomal subunit protein bL33m when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 39S ribosomal protein L33, mitochondrial when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum large ribosomal subunit protein bL33m amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 39S ribosomal protein L33, mitochondrial amount") AnnotationAssertion(rdfs:label "level of 39S ribosomal protein L33, mitochondrial in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 39S ribosomal protein L34, mitochondrial in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a large ribosomal subunit protein bL34m when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 39S ribosomal protein L34, mitochondrial when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum large ribosomal subunit protein bL34m amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 39S ribosomal protein L34, mitochondrial amount") AnnotationAssertion(rdfs:label "level of 39S ribosomal protein L34, mitochondrial in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 39S ribosomal protein L38, mitochondrial in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a large ribosomal subunit protein mL38 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 39S ribosomal protein L38, mitochondrial when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum large ribosomal subunit protein mL38 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 39S ribosomal protein L38, mitochondrial amount") AnnotationAssertion(rdfs:label "level of 39S ribosomal protein L38, mitochondrial in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 39S ribosomal protein L52, mitochondrial in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a large ribosomal subunit protein mL52 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 39S ribosomal protein L52, mitochondrial when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum large ribosomal subunit protein mL52 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 39S ribosomal protein L52, mitochondrial amount") AnnotationAssertion(rdfs:label "level of 39S ribosomal protein L52, mitochondrial in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 39S ribosomal protein L55, mitochondrial in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a large ribosomal subunit protein mL55 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 39S ribosomal protein L55, mitochondrial when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum large ribosomal subunit protein mL55 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 39S ribosomal protein L55, mitochondrial amount") AnnotationAssertion(rdfs:label "level of 39S ribosomal protein L55, mitochondrial in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 28S ribosomal protein S14, mitochondrial in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a small ribosomal subunit protein uS14m when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 28S ribosomal protein S14, mitochondrial when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum small ribosomal subunit protein uS14m amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 28S ribosomal protein S14, mitochondrial amount") AnnotationAssertion(rdfs:label "level of 28S ribosomal protein S14, mitochondrial in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -82341,9 +82343,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of nodal modulator 2 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a BOS complex subunit NOMO2 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a nodal modulator 2 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum BOS complex subunit NOMO2 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum nodal modulator 2 amount") AnnotationAssertion(rdfs:label "level of nodal modulator 2 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -82365,9 +82367,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of nitric oxide synthase, endothelial in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a nitric oxide synthase 3 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a nitric oxide synthase, endothelial when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum nitric oxide synthase 3 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum nitric oxide synthase, endothelial amount") AnnotationAssertion(rdfs:label "level of nitric oxide synthase, endothelial in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -82565,9 +82567,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of nuclear receptor subfamily 4 group A member 1 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a nuclear receptor subfamily 4 immunity group A member 1 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a nuclear receptor subfamily 4 group A member 1 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum nuclear receptor subfamily 4 immunity group A member 1 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum nuclear receptor subfamily 4 group A member 1 amount") AnnotationAssertion(rdfs:label "level of nuclear receptor subfamily 4 group A member 1 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -84069,17 +84071,17 @@ EquivalentClasses( ObjectIntersectio # Class: (level of cAMP-specific 3',5'-cyclic phosphodiesterase 4A in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 3',5'-cyclic-AMP phosphodiesterase 4A when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a cAMP-specific 3',5'-cyclic phosphodiesterase 4A when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 3',5'-cyclic-AMP phosphodiesterase 4A amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum cAMP-specific 3',5'-cyclic phosphodiesterase 4A amount") AnnotationAssertion(rdfs:label "level of cAMP-specific 3',5'-cyclic phosphodiesterase 4A in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of cAMP-specific 3',5'-cyclic phosphodiesterase 4C in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 3',5'-cyclic-AMP phosphodiesterase 4C when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a cAMP-specific 3',5'-cyclic phosphodiesterase 4C when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 3',5'-cyclic-AMP phosphodiesterase 4C amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum cAMP-specific 3',5'-cyclic phosphodiesterase 4C amount") AnnotationAssertion(rdfs:label "level of cAMP-specific 3',5'-cyclic phosphodiesterase 4C in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -87261,9 +87263,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 5-hydroxymethyl-dUMP N-hydrolase when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 5-hydroxymethyl-dUMP N-hydrolase amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 amount") AnnotationAssertion(rdfs:label "level of 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -87373,9 +87375,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of regenerating islet-derived protein 3-gamma in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a obsolete regenerating islet-derived protein 3-gamma when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a regenerating islet-derived protein 3-gamma when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum obsolete regenerating islet-derived protein 3-gamma amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum regenerating islet-derived protein 3-gamma amount") AnnotationAssertion(rdfs:label "level of regenerating islet-derived protein 3-gamma in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -88053,57 +88055,57 @@ EquivalentClasses( ObjectIntersectio # Class: (level of 60S ribosomal protein L11 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a eukaryotic-type large ribosomal subunit protein uL5 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 60S ribosomal protein L11 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum eukaryotic-type large ribosomal subunit protein uL5 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 60S ribosomal protein L11 amount") AnnotationAssertion(rdfs:label "level of 60S ribosomal protein L11 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 60S ribosomal protein L12 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a eukaryotic-type large ribosomal subunit protein uL11 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 60S ribosomal protein L12 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum eukaryotic-type large ribosomal subunit protein uL11 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 60S ribosomal protein L12 amount") AnnotationAssertion(rdfs:label "level of 60S ribosomal protein L12 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 60S ribosomal protein L26-like 1 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a ribosomal protein uL24-like when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 60S ribosomal protein L26-like 1 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum ribosomal protein uL24-like amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 60S ribosomal protein L26-like 1 amount") AnnotationAssertion(rdfs:label "level of 60S ribosomal protein L26-like 1 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 60S ribosomal protein L30 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a large ribosomal subunit protein eL30 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 60S ribosomal protein L30 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum large ribosomal subunit protein eL30 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 60S ribosomal protein L30 amount") AnnotationAssertion(rdfs:label "level of 60S ribosomal protein L30 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 60S ribosomal protein L38 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a large ribosomal subunit protein eL38 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 60S ribosomal protein L38 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum large ribosomal subunit protein eL38 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 60S ribosomal protein L38 amount") AnnotationAssertion(rdfs:label "level of 60S ribosomal protein L38 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 60S ribosomal protein L5 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a eukaryotic-type large ribosomal subunit protein uL18 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 60S ribosomal protein L5 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum eukaryotic-type large ribosomal subunit protein uL18 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 60S ribosomal protein L5 amount") AnnotationAssertion(rdfs:label "level of 60S ribosomal protein L5 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 60S acidic ribosomal protein P2 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a large ribosomal subunit protein P2 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 60S acidic ribosomal protein P2 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum large ribosomal subunit protein P2 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 60S acidic ribosomal protein P2 amount") AnnotationAssertion(rdfs:label "level of 60S acidic ribosomal protein P2 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -88149,65 +88151,65 @@ EquivalentClasses( ObjectIntersectio # Class: (level of 40S ribosomal protein S12 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a small ribosomal subunit protein eS12 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 40S ribosomal protein S12 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum small ribosomal subunit protein eS12 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 40S ribosomal protein S12 amount") AnnotationAssertion(rdfs:label "level of 40S ribosomal protein S12 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 40S ribosomal protein S14 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a eukaryotic-type small ribosomal subunit protein uS11 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 40S ribosomal protein S14 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum eukaryotic-type small ribosomal subunit protein uS11 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 40S ribosomal protein S14 amount") AnnotationAssertion(rdfs:label "level of 40S ribosomal protein S14 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 40S ribosomal protein S19 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a small ribosomal subunit protein eS19 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 40S ribosomal protein S19 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum small ribosomal subunit protein eS19 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 40S ribosomal protein S19 amount") AnnotationAssertion(rdfs:label "level of 40S ribosomal protein S19 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 40S ribosomal protein S20 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a eukaryotic-type small ribosomal subunit protein uS10 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 40S ribosomal protein S20 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum eukaryotic-type small ribosomal subunit protein uS10 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 40S ribosomal protein S20 amount") AnnotationAssertion(rdfs:label "level of 40S ribosomal protein S20 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 40S ribosomal protein S25 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a small ribosomal subunit protein eS25 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 40S ribosomal protein S25 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum small ribosomal subunit protein eS25 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 40S ribosomal protein S25 amount") AnnotationAssertion(rdfs:label "level of 40S ribosomal protein S25 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 40S ribosomal protein S3a in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a small ribosomal subunit protein eS1 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 40S ribosomal protein S3a when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum small ribosomal subunit protein eS1 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 40S ribosomal protein S3a amount") AnnotationAssertion(rdfs:label "level of 40S ribosomal protein S3a in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 40S ribosomal protein S4, X isoform in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a small ribosomal subunit protein eS4, X isoform when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 40S ribosomal protein S4, X isoform when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum small ribosomal subunit protein eS4, X isoform amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 40S ribosomal protein S4, X isoform amount") AnnotationAssertion(rdfs:label "level of 40S ribosomal protein S4, X isoform in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of 40S ribosomal protein S5 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a eukaryotic-type small ribosomal subunit protein uS7 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 40S ribosomal protein S5 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum eukaryotic-type small ribosomal subunit protein uS7 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum 40S ribosomal protein S5 amount") AnnotationAssertion(rdfs:label "level of 40S ribosomal protein S5 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -89789,9 +89791,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of neutral and basic amino acid transport protein rBAT in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a amino acid transporter heavy chain SLC3A1 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a neutral and basic amino acid transport protein rBAT when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum amino acid transporter heavy chain SLC3A1 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum neutral and basic amino acid transport protein rBAT amount") AnnotationAssertion(rdfs:label "level of neutral and basic amino acid transport protein rBAT in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -90461,9 +90463,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of ribosome biogenesis protein SPATA5 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a ATPase family gene 2 protein homolog A when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a ribosome biogenesis protein SPATA5 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum ATPase family gene 2 protein homolog A amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum ribosome biogenesis protein SPATA5 amount") AnnotationAssertion(rdfs:label "level of ribosome biogenesis protein SPATA5 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -93117,9 +93119,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of protein TSSC4 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a U5 small nuclear ribonucleoprotein TSSC4 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a protein TSSC4 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum U5 small nuclear ribonucleoprotein TSSC4 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum protein TSSC4 amount") AnnotationAssertion(rdfs:label "level of protein TSSC4 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -94269,9 +94271,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of vascular endothelial growth factor A in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a vascular endothelial growth factor A, long form when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a vascular endothelial growth factor A when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum vascular endothelial growth factor A, long form amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum vascular endothelial growth factor A amount") AnnotationAssertion(rdfs:label "level of vascular endothelial growth factor A in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -95845,9 +95847,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of protein FAM102B in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a EEIG family member 2 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a protein FAM102B when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum EEIG family member 2 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum protein FAM102B amount") AnnotationAssertion(rdfs:label "level of protein FAM102B in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -96917,9 +96919,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of cell surface hyaluronidase in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a cell surface hyaluronidase CEMIP2 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a cell surface hyaluronidase when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum cell surface hyaluronidase CEMIP2 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum cell surface hyaluronidase amount") AnnotationAssertion(rdfs:label "level of cell surface hyaluronidase in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -96989,9 +96991,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of putative chondrosarcoma-associated gene 1 protein in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a chondrosarcoma-associated gene 1 protein when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a putative chondrosarcoma-associated gene 1 protein when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum chondrosarcoma-associated gene 1 protein amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum putative chondrosarcoma-associated gene 1 protein amount") AnnotationAssertion(rdfs:label "level of putative chondrosarcoma-associated gene 1 protein in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -97157,9 +97159,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of WSC domain-containing protein 2 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a sialate:O-sulfotransferase 2 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a WSC domain-containing protein 2 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum sialate:O-sulfotransferase 2 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum WSC domain-containing protein 2 amount") AnnotationAssertion(rdfs:label "level of WSC domain-containing protein 2 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -97189,9 +97191,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of cotranscriptional regulator FAM172A in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a cotranscriptional regulator ARB2A when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a cotranscriptional regulator FAM172A when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum cotranscriptional regulator ARB2A amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum cotranscriptional regulator FAM172A amount") AnnotationAssertion(rdfs:label "level of cotranscriptional regulator FAM172A in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -97605,9 +97607,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of adhesion G-protein coupled receptor F2 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a putative adhesion G protein-coupled receptor F2P when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a adhesion G-protein coupled receptor F2 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum putative adhesion G protein-coupled receptor F2P amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum adhesion G-protein coupled receptor F2 amount") AnnotationAssertion(rdfs:label "level of adhesion G-protein coupled receptor F2 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -99669,9 +99671,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of acidic leucine-rich nuclear phosphoprotein 32 family member C in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a putative uncharacterized protein ANP32CP when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a acidic leucine-rich nuclear phosphoprotein 32 family member C when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum putative uncharacterized protein ANP32CP amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum acidic leucine-rich nuclear phosphoprotein 32 family member C amount") AnnotationAssertion(rdfs:label "level of acidic leucine-rich nuclear phosphoprotein 32 family member C in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -100053,9 +100055,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of protein Frey in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a protein Frey 1 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a protein Frey when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum protein Frey 1 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum protein Frey amount") AnnotationAssertion(rdfs:label "level of protein Frey in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -100117,9 +100119,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of HUWE1-associated protein modifying stress responses in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a HUWE1-associated protein modifying stress responses 1 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a HUWE1-associated protein modifying stress responses when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum HUWE1-associated protein modifying stress responses 1 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum HUWE1-associated protein modifying stress responses amount") AnnotationAssertion(rdfs:label "level of HUWE1-associated protein modifying stress responses in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -100133,9 +100135,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of UPF0692 protein C19orf54 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a actin maturation protease when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a UPF0692 protein C19orf54 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum actin maturation protease amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum UPF0692 protein C19orf54 amount") AnnotationAssertion(rdfs:label "level of UPF0692 protein C19orf54 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -101013,9 +101015,9 @@ EquivalentClasses( ObjectIntersectio # Class: (level of nodal modulator 1 in blood serum) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a BOS complex subunit NOMO1 when measured in blood serum.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a nodal modulator 1 when measured in blood serum.") AnnotationAssertion( "https://orcid.org/0000-0001-8314-2140") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum BOS complex subunit NOMO1 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood serum nodal modulator 1 amount") AnnotationAssertion(rdfs:label "level of nodal modulator 1 in blood serum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -105473,8 +105475,8 @@ EquivalentClasses( ObjectIntersectio # Class: (vascular endothelial growth factor A amount) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "The amount of a vascular endothelial growth factor A, long form.") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "amount of vascular endothelial growth factor A, long form") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "The amount of a vascular endothelial growth factor A.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "amount of vascular endothelial growth factor A") AnnotationAssertion(rdfs:label "vascular endothelial growth factor A amount") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -105774,8 +105776,8 @@ EquivalentClasses( ObjectIntersectio # Class: (teratocarcinoma-derived growth factor 1 amount) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "The amount of a protein Cripto.") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "amount of protein Cripto") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "The amount of a teratocarcinoma-derived growth factor 1.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "amount of teratocarcinoma-derived growth factor 1") AnnotationAssertion(rdfs:label "teratocarcinoma-derived growth factor 1 amount") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -110874,10 +110876,10 @@ EquivalentClasses( ObjectIntersectio # Class: (level of nitric oxide synthase, endothelial in blood) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a nitric oxide synthase 3 when measured in blood.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a nitric oxide synthase, endothelial when measured in blood.") AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") AnnotationAssertion( "PMID:37794183") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood nitric oxide synthase 3 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood nitric oxide synthase, endothelial amount") AnnotationAssertion(rdfs:label "level of nitric oxide synthase, endothelial in blood") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -111648,10 +111650,10 @@ EquivalentClasses( ObjectIntersectio # Class: (level of 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 in blood) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 5-hydroxymethyl-dUMP N-hydrolase when measured in blood.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 when measured in blood.") AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") AnnotationAssertion( "PMID:37794183") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood 5-hydroxymethyl-dUMP N-hydrolase amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 amount") AnnotationAssertion(rdfs:label "level of 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 in blood") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -113061,10 +113063,10 @@ EquivalentClasses( ObjectIntersectio # Class: (level of cell surface hyaluronidase in blood) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a cell surface hyaluronidase CEMIP2 when measured in blood.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a cell surface hyaluronidase when measured in blood.") AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") AnnotationAssertion( "PMID:37794183") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood cell surface hyaluronidase CEMIP2 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood cell surface hyaluronidase amount") AnnotationAssertion(rdfs:label "level of cell surface hyaluronidase in blood") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -113088,10 +113090,10 @@ EquivalentClasses( ObjectIntersectio # Class: (level of cotranscriptional regulator FAM172A in blood) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a cotranscriptional regulator ARB2A when measured in blood.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a cotranscriptional regulator FAM172A when measured in blood.") AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") AnnotationAssertion( "PMID:37794183") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood cotranscriptional regulator ARB2A amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood cotranscriptional regulator FAM172A amount") AnnotationAssertion(rdfs:label "level of cotranscriptional regulator FAM172A in blood") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -113502,10 +113504,10 @@ EquivalentClasses( ObjectIntersectio # Class: (level of nodal modulator 1 in blood) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a BOS complex subunit NOMO1 when measured in blood.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a nodal modulator 1 when measured in blood.") AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") AnnotationAssertion( "PMID:37794183") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood BOS complex subunit NOMO1 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood nodal modulator 1 amount") AnnotationAssertion(rdfs:label "level of nodal modulator 1 in blood") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -113709,10 +113711,10 @@ EquivalentClasses( ObjectIntersectio # Class: (level of pancreatic prohormone in blood) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a pancreatic polypeptide prohormone when measured in blood.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a pancreatic prohormone when measured in blood.") AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") AnnotationAssertion( "PMID:38565889") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood pancreatic polypeptide prohormone amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood pancreatic prohormone amount") AnnotationAssertion(rdfs:label "level of pancreatic prohormone in blood") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -116175,10 +116177,10 @@ EquivalentClasses( ObjectIntersectio # Class: (level of ciliary microtubule inner protein 4 in blood) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a ciliary microtubule inner protein 4 when measured in blood.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a testis-expressed protein 33 when measured in blood.") AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") AnnotationAssertion( "PMID:37794183") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood ciliary microtubule inner protein 4 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood testis-expressed protein 33 amount") AnnotationAssertion(rdfs:label "level of ciliary microtubule inner protein 4 in blood") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -116202,10 +116204,10 @@ EquivalentClasses( ObjectIntersectio # Class: (level of pre-pro-epidermal growth factor in blood) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a pre-pro-epidermal growth factor when measured in blood.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a pro-epidermal growth factor when measured in blood.") AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") AnnotationAssertion( "PMID:37794183") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood pre-pro-epidermal growth factor amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood pro-epidermal growth factor amount") AnnotationAssertion(rdfs:label "level of pre-pro-epidermal growth factor in blood") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -116382,10 +116384,10 @@ EquivalentClasses( ObjectIntersectio # Class: (level of exosome complex component 10 in blood) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a exosome complex component 10 when measured in blood.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a exosome component 10 when measured in blood.") AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") AnnotationAssertion( "PMID:37794183") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood exosome complex component 10 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood exosome component 10 amount") AnnotationAssertion(rdfs:label "level of exosome complex component 10 in blood") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -117678,28 +117680,28 @@ EquivalentClasses( ObjectIntersectio # Class: (level of large ribosomal subunit protein uL24m in blood) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a large ribosomal subunit protein uL24m when measured in blood.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 39S ribosomal protein L24, mitochondrial when measured in blood.") AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") AnnotationAssertion( "PMID:37794183") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood large ribosomal subunit protein uL24m amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood 39S ribosomal protein L24, mitochondrial amount") AnnotationAssertion(rdfs:label "level of large ribosomal subunit protein uL24m in blood") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of large ribosomal subunit protein mL46 in blood) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a large ribosomal subunit protein mL46 when measured in blood.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 39S ribosomal protein L46, mitochondrial when measured in blood.") AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") AnnotationAssertion( "PMID:37794183") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood large ribosomal subunit protein mL46 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood 39S ribosomal protein L46, mitochondrial amount") AnnotationAssertion(rdfs:label "level of large ribosomal subunit protein mL46 in blood") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of small ribosomal subunit protein bS16m in blood) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a small ribosomal subunit protein bS16m when measured in blood.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 28S ribosomal protein S16, mitochondrial when measured in blood.") AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") AnnotationAssertion( "PMID:37794183") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood small ribosomal subunit protein bS16m amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood 28S ribosomal protein S16, mitochondrial amount") AnnotationAssertion(rdfs:label "level of small ribosomal subunit protein bS16m in blood") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -117885,10 +117887,10 @@ EquivalentClasses( ObjectIntersectio # Class: (level of BOS complex subunit NCLN in blood) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a BOS complex subunit NCLN when measured in blood.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a nicalin when measured in blood.") AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") AnnotationAssertion( "PMID:37794183") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood BOS complex subunit NCLN amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood nicalin amount") AnnotationAssertion(rdfs:label "level of BOS complex subunit NCLN in blood") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -118047,10 +118049,10 @@ EquivalentClasses( ObjectIntersectio # Class: (level of nitric oxide synthase 1 in blood) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a nitric oxide synthase 1 when measured in blood.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a nitric oxide synthase, brain when measured in blood.") AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") AnnotationAssertion( "PMID:37794183") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood nitric oxide synthase 1 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood nitric oxide synthase, brain amount") AnnotationAssertion(rdfs:label "level of nitric oxide synthase 1 in blood") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -119109,19 +119111,19 @@ EquivalentClasses( ObjectIntersectio # Class: (level of large ribosomal subunit protein eL14 in blood) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a large ribosomal subunit protein eL14 when measured in blood.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 60S ribosomal protein L14 when measured in blood.") AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") AnnotationAssertion( "PMID:37794183") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood large ribosomal subunit protein eL14 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood 60S ribosomal protein L14 amount") AnnotationAssertion(rdfs:label "level of large ribosomal subunit protein eL14 in blood") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) # Class: (level of small ribosomal subunit protein eS10 in blood) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a small ribosomal subunit protein eS10 when measured in blood.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a 40S ribosomal protein S10 when measured in blood.") AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") AnnotationAssertion( "PMID:37794183") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood small ribosomal subunit protein eS10 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood 40S ribosomal protein S10 amount") AnnotationAssertion(rdfs:label "level of small ribosomal subunit protein eS10 in blood") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -119442,10 +119444,10 @@ EquivalentClasses( ObjectIntersectio # Class: (level of superkiller complex protein 2 in blood) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a superkiller complex protein 2 when measured in blood.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a SKI2 subunit of superkiller complex protein when measured in blood.") AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") AnnotationAssertion( "PMID:37794183") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood superkiller complex protein 2 amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood SKI2 subunit of superkiller complex protein amount") AnnotationAssertion(rdfs:label "level of superkiller complex protein 2 in blood") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -120693,10 +120695,10 @@ EquivalentClasses( ObjectIntersectio # Class: (level of metabotropic glycine receptor in blood) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a metabotropic glycine receptor when measured in blood.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "The amount of a probable G-protein coupled receptor 158 when measured in blood.") AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") AnnotationAssertion( "PMID:37794183") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood metabotropic glycine receptor amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute_location") "blood probable G-protein coupled receptor 158 amount") AnnotationAssertion(rdfs:label "level of metabotropic glycine receptor in blood") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) @@ -121500,6 +121502,14 @@ AnnotationAssertion( "trait in response to gabapentin") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) +# Class: (age of onset of isolated dystonia) + +AnnotationAssertion( "The age at which isolated dystonia manifestations first appear.") +AnnotationAssertion( "age at onset of isolated dystonia") +AnnotationAssertion( "age isolated dystonia symptoms begin") +AnnotationAssertion(rdfs:label "age of onset of isolated dystonia") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (aggressive behavior towards inanimate objects rate) AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "The rate of a aggressive behavior towards inanimate objects.")