diff --git a/dockers/hto-adt-postprocess/build.sh b/dockers/hto-adt-postprocess/build.sh index 175ae44..755458d 100755 --- a/dockers/hto-adt-postprocess/build.sh +++ b/dockers/hto-adt-postprocess/build.sh @@ -2,4 +2,10 @@ source config.sh +if [ ! -r ./data/10x-hto-gex-mapper.pickle ] +then + # pre-build 10x-hto-gex-mapper.pickle + python hto_gex_mapper.py +fi + docker build -t ${image_name}:${version} . diff --git a/dockers/hto-adt-postprocess/config.sh b/dockers/hto-adt-postprocess/config.sh index 6f51fd8..4c4baad 100644 --- a/dockers/hto-adt-postprocess/config.sh +++ b/dockers/hto-adt-postprocess/config.sh @@ -2,7 +2,6 @@ version="0.3.3" # docker related registry="583643567512.dkr.ecr.us-east-1.amazonaws.com" -registry="hisplan" image_name="cromwell-hto-adt-postprocess" # set this to 1 if you want to create a repository in AWS ECR