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lack of CRS part #18

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lizihe21 opened this issue Nov 6, 2023 · 0 comments
Open

lack of CRS part #18

lizihe21 opened this issue Nov 6, 2023 · 0 comments

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@lizihe21
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lizihe21 commented Nov 6, 2023

Hi, I have gone through the PECA pipeline without ENCODE. But I don't find the result related to CRS mentionded in TimeReg article, neither in the source code. It is supposed to build a curated network based on TRS and CRS filtering according to the article. But I find the RE-TG pairs in the present pipeline are simply identied by overlap with prior data, which is generatted by a linear model in our cases.
Is it my misunderstanding?

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