Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

lack of CRS part #18

Open
lizihe21 opened this issue Nov 6, 2023 · 0 comments
Open

lack of CRS part #18

lizihe21 opened this issue Nov 6, 2023 · 0 comments

Comments

@lizihe21
Copy link

lizihe21 commented Nov 6, 2023

Hi, I have gone through the PECA pipeline without ENCODE. But I don't find the result related to CRS mentionded in TimeReg article, neither in the source code. It is supposed to build a curated network based on TRS and CRS filtering according to the article. But I find the RE-TG pairs in the present pipeline are simply identied by overlap with prior data, which is generatted by a linear model in our cases.
Is it my misunderstanding?
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@lizihe21