From 93dbbf7d709590a12996df1e139c94def6fdfb75 Mon Sep 17 00:00:00 2001 From: cooperl09 Date: Tue, 25 Sep 2018 11:31:08 -0700 Subject: [PATCH] updated files for release --- po.obo | 25 +++++++++---------------- po.owl | 17 ++--------------- 2 files changed, 11 insertions(+), 31 deletions(-) diff --git a/po.obo b/po.obo index 6f8d7d6..aba0e51 100644 --- a/po.obo +++ b/po.obo @@ -1,5 +1,5 @@ format-version: 1.2 -data-version: releases/2018-08-14 +data-version: releases/2018-09-25 saved-by: cooperl subsetdef: Angiosperm "Term for angiosperms" subsetdef: Arabidopsis "Term used for Arabidopsis" @@ -6210,7 +6210,7 @@ is_a: PO:0009081 ! higher order inflorescence axis id: PO:0006322 name: third order inflorescence axis namespace: plant_anatomy -def: "A higher order inflorescence axis (PO:0009081) that develops from an inflorescence axillary meristem (PO:0009105) of a second order inflorescence axis (PO:0006322)." [POC:Laurel_Cooper, POC:Ramona_Walls] {comment="NYBG:Brandon_Sinn", comment="NYBG:Dario_Cavaliere"} +def: "A higher order inflorescence axis (PO:0009081) that develops from an inflorescence axillary meristem (PO:0009105) of a second order inflorescence axis (PO:0006322)." [POC:Laurel_Cooper, POC:Ramona_Walls] {comment="NYBG:Dario_Cavaliere", comment="NYBG:Brandon_Sinn"} synonym: "eje de tercero orden de la inflorescencia (Spanish, exact)" EXACT Spanish [] synonym: "second order inflorescence branch (exact)" EXACT [] synonym: "second order paraclade (exact)" EXACT [] @@ -11115,7 +11115,7 @@ alt_id: PO:0020117 alt_id: PO:0020118 alt_id: PO:0020119 alt_id: PO:0020120 -def: "A reproductive shoot system (PO:0025082) that has as parts all of the shoot axes (PO:0025029) and flowers (PO:0009046; must have two or more) distal to the most distal leaf (PO:0009025)." [POC:Laurel_Cooper, POC:Ramona_Walls] {comment="NYBG:Brandon_Sinn", comment="NYBG:Dario_Cavaliere"} +def: "A reproductive shoot system (PO:0025082) that has as parts all of the shoot axes (PO:0025029) and flowers (PO:0009046; must have two or more) distal to the most distal leaf (PO:0009025)." [POC:Laurel_Cooper, POC:Ramona_Walls] {comment="NYBG:Dario_Cavaliere", comment="NYBG:Brandon_Sinn"} comment: An inflorescence is a reproductive shoot system from which at least two flowers develop. The growth pattern of an inflorescence may be monopodial (single main shoot axis), sympodial (growth only occurs from axillary meristems), or both. An inflorescence axis (PO:0020122) can be determinate or indeterminate. An inflorescence flower pedicel (PO:0009052) is the ultimate axis in an inflorescence. The flower (PO:0009046) of many plants, for example Magnolia spp., is solitary. subset: Angiosperm subset: reference @@ -11149,7 +11149,7 @@ id: PO:0009052 name: inflorescence flower pedicel namespace: plant_anatomy def: "A flower pedicel (PO:0030113) that bears a flower (PO:0009046) in an inflorescence (PO:0009049)." [ISBN:0716710072, NYBG:Brandon_Sinn, NYBG:Dario_Cavaliere, POC:Laurel_Cooper] -comment: An inflorescence flower pedicel is the ultimate shoot axis (PO:0025029) in an inflorescence (PO:0009049). {xref="NYBG:Dario_Cavaliere", xref="NYBG:Brandon_Sinn"} +comment: An inflorescence flower pedicel is the ultimate shoot axis (PO:0025029) in an inflorescence (PO:0009049). {xref="NYBG:Brandon_Sinn", xref="NYBG:Dario_Cavaliere"} subset: Angiosperm subset: reference subset: Tomato @@ -13236,7 +13236,7 @@ id: PO:0020122 name: inflorescence axis namespace: plant_anatomy def: "A shoot axis (PO:0025029) that is part of an inflorescence (PO:0009049)." [POC:curators] -comment: An inflorescence axis (PO:0020122) has either a determinate apex, which terminates in a flower meristem (PO:0000229), or has an indeterminate apex, which terminates in an inflorescence apical meristem (PO:0009108). An inflorescence pedicel (PO:0009052) is the simplest example of a determinate inflorescence axis. {comment="POC:Laurel_Cooper", xref="NYBG:Dario_Cavaliere", xref="NYBG:Brandon_Sinn"} +comment: An inflorescence axis (PO:0020122) has either a determinate apex, which terminates in a flower meristem (PO:0000229), or has an indeterminate apex, which terminates in an inflorescence apical meristem (PO:0009108). An inflorescence pedicel (PO:0009052) is the simplest example of a determinate inflorescence axis. {xref="NYBG:Brandon_Sinn", comment="POC:Laurel_Cooper", xref="NYBG:Dario_Cavaliere"} subset: Angiosperm subset: TraitNet synonym: "eje de la inflorescencia (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] @@ -15045,7 +15045,7 @@ id: PO:0025104 name: first order inflorescence axis namespace: plant_anatomy def: "An inflorescence axis (PO:0020122) that is the primary or main axis of an inflorescence (PO:0009049)." [POC:Ramona_Walls] -comment: Monopodial inflorescences, such as a raceme, have a centrally-located main axis; this axis is a first order inflorescence axis. In contrast, sympodial inflorescences, such as the riphidium, do not have a centrally-located main axis. The basal-most portion of a first order inflorescence axis is referred to as a peduncle (PO:0009053). {xref="NYBG:Dario_Cavaliere", xref="NYBG:Brandon_Sinn"} +comment: Monopodial inflorescences, such as a raceme, have a centrally-located main axis; this axis is a first order inflorescence axis. In contrast, sympodial inflorescences, such as the riphidium, do not have a centrally-located main axis. The basal-most portion of a first order inflorescence axis is referred to as a peduncle (PO:0009053). {xref="NYBG:Brandon_Sinn", xref="NYBG:Dario_Cavaliere"} subset: Angiosperm synonym: "inflorescence rachis (exact)" EXACT [FNA:78c2e094-f6db-4d95-b8bb-3e2bdaebf764] synonym: "inflorescence rhachis (exact)" EXACT [FNA:f76f9272-ef24-4be8-a9b3-3da4c06bd8cf] @@ -15063,7 +15063,7 @@ creation_date: 2011-01-05T08:41:49Z id: PO:0025105 name: fourth order inflorescence axis namespace: plant_anatomy -def: "A higher order inflorescence axis (PO:0009081) that develops from an inflorescence axillary meristem (PO:0009105) of a third order inflorescence axis (PO:0025105)." [POC:Laurel_Cooper, POC:Ramona_Walls] {comment="NYBG:Brandon_Sinn", comment="NYBG:Dario_Cavaliere"} +def: "A higher order inflorescence axis (PO:0009081) that develops from an inflorescence axillary meristem (PO:0009105) of a third order inflorescence axis (PO:0025105)." [POC:Laurel_Cooper, POC:Ramona_Walls] {comment="NYBG:Dario_Cavaliere", comment="NYBG:Brandon_Sinn"} synonym: "eje de cuarto orden de la inflorescencia (Spanish, exact)" EXACT Spanish [] synonym: "tertiary inflorescence branch (exact)" EXACT [] synonym: "third order inflorescence branch (exact)" EXACT [] @@ -15079,7 +15079,7 @@ creation_date: 2011-01-05T08:56:27Z id: PO:0025106 name: fifth order inflorescence axis namespace: plant_anatomy -def: "A higher order inflorescence axis (PO:0009081) that develops from an inflorescence axillary meristem (PO:0009105) of a fourth order inflorescence axis (PO:0025106)." [POC:Laurel_Cooper, POC:Ramona_Walls] {comment="NYBG:Brandon_Sinn", comment="NYBG:Dario_Cavaliere"} +def: "A higher order inflorescence axis (PO:0009081) that develops from an inflorescence axillary meristem (PO:0009105) of a fourth order inflorescence axis (PO:0025106)." [POC:Laurel_Cooper, POC:Ramona_Walls] {comment="NYBG:Dario_Cavaliere", comment="NYBG:Brandon_Sinn"} synonym: "eje de quinto orden de la inflorescencia (Spanish, exact)" EXACT Spanish [] synonym: "fourth order inflorescence branch (exact)" EXACT [] synonym: "第四花序分枝 (Japanese, related)" RELATED [NIG:Yukiko_Yamazaki] @@ -18504,8 +18504,8 @@ name: awn namespace: plant_anatomy def: "A cardinal organ part that is a slender, more or less straight and stiff, fine-pointed, terminal or subterminal appendage of a glume, lemma, or palea." [FNA:glossary] comment: Found in a spikelet of Poaceae. Sometimes the awn is a continuation of the bearing structure's central primary vein. -synonym: "arista (exact)" EXACT [FNA:5e6f29b2-6a37-4663-888b-7cb315ef277e] synonym: "arista (exact)" EXACT [FNA:399ba59a-deb1-4bc9-b7e5-ed2b89700d5c] +synonym: "arista (exact)" EXACT [FNA:5e6f29b2-6a37-4663-888b-7cb315ef277e] synonym: "arista (Spanish, exact)" EXACT Spanish [POC:Maria_Alejandra_Gandolfo] synonym: "bristle (broad)" BROAD [FNA:78121d02-e7db-45eb-b1b7-011d5026beae] synonym: "seta (related)" RELATED [FNA:c751440c-a7b3-4997-aed8-47f8254fd05f] @@ -22253,13 +22253,6 @@ xref: PO_GIT:682 is_a: PO:0025007 ! collective plant organ structure relationship: part_of PO:0030018 ! gametophore -[Term] -id: PO:0028006 -name: stipe -def: "In progress.." [] -is_a: PO:0025066 ! stalk -property_value: http://purl.org/dc/elements/1.1/date 2018-04-25T23:29:50Z xsd:dateTime - [Term] id: PO:0030001 name: chloronema cell diff --git a/po.owl b/po.owl index f4a96fb..623193c 100644 --- a/po.owl +++ b/po.owl @@ -11,7 +11,7 @@ xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:po="http://purl.obolibrary.org/obo/po#"> - + CL part_of NCBITaxon:33090 CARO @@ -74831,19 +74831,6 @@ these may not begin or end simultaneously. Not all seeds go through a seed dorma - - - - - In progress.. - 2018-04-25T23:29:50Z - plant_ontology - PO:0028006 - stipe - - - - @@ -80818,5 +80805,5 @@ Examples: green ash (Fraxinus pennsylvanicum) and tree-of-heaven (Ailanthus alti - +