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I am running bootstrap analysis for a net and below are my commands:
using DataFrames
using PhyloNetworks
using Gadfly
using PhyloPlots
import Cairo
using Cairo
addprocs(50)
@everywhere using PhyloNetworks
net7=readTopology("net7_bucky.out")
bootTrees = readBootstrapTrees("BSlistfiles")
bootnet = bootsnaq(net7, bootTrees, hmax=8, nrep=100, runs=50, filename="snaq/bootsnaq7_raxmlboot")
This step has been running on a linux machine with 56 cores for 11 days and only 14 replicates have been finished.
I am wondering is it normal to take so long in this step? Anything I can do to speed up?
Thanks!
The text was updated successfully, but these errors were encountered:
I am running bootstrap analysis for a net and below are my commands:
This step has been running on a linux machine with 56 cores for 11 days and only 14 replicates have been finished.
I am wondering is it normal to take so long in this step? Anything I can do to speed up?
Thanks!
The text was updated successfully, but these errors were encountered: