-
Notifications
You must be signed in to change notification settings - Fork 4
/
setup.cfg
118 lines (103 loc) · 2.56 KB
/
setup.cfg
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
##########################
# Setup.py Configuration #
##########################
[metadata]
name = guiltytargets
version = 0.0.3-dev
description = A tool for ranking potential targets for a given disease
long_description = file: README.rst
# URLs associated with the Project
url = https://github.com/guiltytargets/guiltytargets
download_url = https://github.com/guiltytargets/guiltytargets/releases
project_urls =
Bug Tracker = https://github.com/guiltytargets/guiltytargets/issues
Source Code = https://github.com/guiltytargets/guiltytargets
Documentation = https://guiltytargets.readthedocs.io
# Author information
author = Özlem Muslu
author_email = [email protected]
maintainer = Charles Tapley Hoyt
maintainer_email = [email protected]
# License Information
license = MIT
license_file = LICENSE
# Search tags
classifiers =
Development Status :: 4 - Beta
Environment :: Console
Intended Audience :: Developers
Intended Audience :: Science/Research
License :: OSI Approved :: MIT License
Operating System :: OS Independent
Programming Language :: Python
Programming Language :: Python :: 3.8
Programming Language :: Python :: 3.7
Programming Language :: Python :: 3.6
Programming Language :: Python :: 3 :: Only
Topic :: Scientific/Engineering :: Bio-Informatics
keywords =
Target Prioritization
Network Representation Learning
Knowledge Graph Embeddings
Systems Biology
Networks Biology
[options]
install_requires =
numpy
pandas
scipy
scikit-learn
python-igraph
click
tqdm
easy-config
mygene
opentargets
dataclasses-json
# Random options
zip_safe = false
include_package_data = True
python_requires = >=3.6
# Where is my code
packages = find:
package_dir =
= src
[options.packages.find]
where = src
[options.extras_require]
docs =
sphinx
sphinx-rtd-theme
sphinx-click
sphinx-autodoc-typehints
[options.entry_points]
console_scripts =
guiltytargets = guiltytargets.cli:main
######################
# Doc8 Configuration #
# (doc8.ini) #
######################
[doc8]
max-line-length = 120
##########################
# Coverage Configuration #
# (.coveragerc) #
##########################
[coverage:run]
branch = True
source = guiltytargets
omit =
src/guiltytargets/__main__.py
src/guiltytargets/cli.py
tests/*
docs/*
scripts/*
[coverage:paths]
source =
src/guiltytargets
.tox/*/lib/python*/site-packages/guiltytargets
[coverage:report]
show_missing = True
exclude_lines =
def __str__
def __repr__